Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0853 ATGTCTTCCTTCACTTCCTCCTCAAAAAGGCGCGAAAAACTTAAATCCACAGCTAGTAGTACTACTACTACTAATCCAAAGAGAAAGAGGTACAATGTGTACTTGAGTTTCTGCGATGAAGATGCAACTTATTTTGCTACGGAGATCTATTGGGCTCTTAGTATAAAAGCTCGATTCAATGTTTTCTGGGACGATGAAAAGCTTGGAAGTGGAAATCGAGAAATACCAACCTCAGTGCTGAATGTTATAGGAGATTGCAAAGTTGCTGTCATCGTGTTTTCAAGAAATTATGTTAATTCAAGATCGTGTATTCAAGAATTTGAGAAAATAACCGAATGTTGCCTAACCACCGGTGGTCTTATTGTTCTGCCTGTGCTCTATGATGGTCTCAATAACTATTCCGCAATCGGAACAAGTGGAGAGGCTTTTCATGATTTTGTGCATAGAATCTGGATAAAGGAAAACGAATCCTCCTCCAAAGAGGAAGATAAGTTCATGAGTTGGGTGGCAGCAATCACTAAAGCTACCACATATTCAGGACTGATTGATTTCGCAGACAGTTATGGAAGGGAATATATTAAGGATGTAGTTGAAAGTGTTACTCGTGCGGTAAAAAAGAAAAGAGACTTGTTGGGTGTTTTCTATACAGTGAGTGTAAAATCCAGTGTGCAAGATGTGATTCAACTATTGAAACAATCAAGATCTCCTCTCCTACTAGGGATATGGGGGATGGCAGGAATTGGTAAATCAACCATTGCTGAAGCCATTTATAATCGGATTGGTCCCTATTTTGAGCACAAGTACTTGCTCGATAATGTCAGAGAATTTTGGAAAAGAGATGGAGGTCCAGTTTCTTTACAAAAGAAACTTCTTTCTTACAGGGGCATACCAACTGAAATGCAAATAGGTACAATTGAATCAGGAAAAGTTATTTTAAAAGAAAGACTTCAACATAAAAGAGTACTTCTTGTACTTGACAATGTTGATAAATTGGAGCAGCTAAAGTCTCTGTGTGGAAGTTGGGATTGGTTTGGTCCAGGTAGCAAAATAATCATCACGACTAGAGATAGGCATCTACTCAAGGAGCATGGAGTTGACCATATATATACAGTGAAAGAATTGGAAGAACGGGAATCGATTGAGCTTTTTAATCAGTGTGCATTCAGCCAAGCAACAACTCCTCAAGAAGGTTTTGGCGAACTTTCTAGACAATTAGTTACTTATTCTAGGGGATTGCCTTTTGCTCTTAAAGCCCTTGGGGGGTTTTTACATGGAAAGGAAGTACTTGAGTGGAAAAGTGTGTGGAGCAGTCTTGAAAGATTTTCATTTCCAGATCAAGAAGTACTACAAGCTCTAGAAACGAGTTTTGATGATTTGAGTGATGAAGAGAAACAAATATTCCTTGATATAGCATGTTTCTTTAACGGGATGGACAAAAATGACGTACTCCATACATTAAATAGGTCAACACAATGCACAGATCTTCAAATAAGTCTCCTTGAAGACAAGAGCCTTTTAGCCATTGATGAGAATAACAAGCTTCAAATGCATGTTCTACTACAAGCCATGGCAAAATATATCATTAAGATGGAATCAAGTAATAAGACTGATCAGCCAAAGATGTACGATGTGTTCTTGAGTTTTAGAGGGGAAGACAGTCGTGTAAAGTTCATGTCACATCTCTACTCCTCTCTTCAAAATGCGGGTATTCATGCTTTCAGAGACGACAATGAGATTCAACGAGGAGATCAGATCTCAATCTCACTGTTGCGAGCAATTGGACAATCTAGAATTTCTATCATTATTTTGTCTACAAATTATGCTAATTCCCGATGGTGTATGCTAGAGTTGGTGAAGATAATGGAAATTGGTAGAACCAGGGGCATGGTTGTTATGCCTGTGTTCTATGATGTAAATCCCTCAGAAGTACGTCATCAGGACGGTCAGTTTGGAAAGGCTTTTAAAGATCTTATCTCAAAAATTTCAGTGGATGAATCCACCAAGAGTCACTGGAGAAGAGATCTTATTGATATTGGTGGCACAGCAGGGTTTGTACTCGTAGATTCCAGGAATGAAAGTGCAGATATCAAGAATATTGTTGAACATGTCATCCGTTTGCTAGATAGGACCGATTTATTTGTTGCTGAACATCCAGTGGGTGTAGAATCTCGTGTGGAAGCTGCGACTAAGCTACTAAACATCCAAGAATCAGATGTTTTACTTCTAGGGATATGGGGAATGGGTGGTATGGGTAAAACAACAATTGCCAAATCGATTTATAATCAAATTGGGAGCAAATTTGAGGGAAGGAGCTTCATTCTGAATATAAGGGAATTTTGGGAGACAAATAATAATCTAGCTTCTCTACAGCAACAAGTACTTTGTGATGTTTACAAAACAGCAACATTCAAGATACGTGACATAGAATCAGGGAAAAATATATTCAAGGAAAGACTTGCCCAGAATAGGGTACTTGTTGTACTTGATGATGTGAATGAATTGGACCAAGTAAAGGCTCTGTGTGGAAGCCGCGAATGGTTTGGTCCGGGGAGTAGAATAATCATCACCACAAGAGATATGCATCTTCTTAGATCGTGTAGTGTTGATCAAGTGTATAAAATAGAAGAAATGGGCGAAAGTGAATCTCTTGAGCTTTTCAGTTGGCATGCATTCAAGCAACCAAGTCCGACAAAAGCTTATGCTGCACATTCAGCAGACATGATTGCTTATTCTGGGAGATTGCCACTAGCACTTCAAGTCCTTGGGTCCTATTTGTCTGACTGTGAAATAACAGAGTGGCATAAAGTTTTGTACAAACTCAAATGTATTCCCCATGATGAAGTACATAAGAAGCTAAAAGTAAGCTTTGATGGTTTAAAAGATGTTACAGAGAAACAAATATTCCTTGATATAGCCTGTTTCTTTATCGGGATGGACAAAAATGATGTAATACAAATATTAAATGGGTGTGGGTTTTTTCCTGATATTGGAATTAAAGTCCTTATAGAGCGGACGCTTGTAACTGTTGACCATAGGAACAAGCTTAGAATGCATGAATTGTTGAGAGACATGGGAAGACAAATAGTTTATGAGGAATCACCGTTTGATCCTGAGAAGCGCAGTAGGTTGTGGCGGCGTGAGGAAGTGTTTGATATATTATCAAAGTATAAGGGAACAGAAGCTGTCAAGGGACTGGCTTTGGAGTTTCCAAGAGAAAATACTGTTTGTCTGAATACCAAAGCATTTAAGAAGATGAATAAACTTAGATTGCTTCAACTTTCCGGGGTGCAGCTTCATGGAGATTTTAAATATCTTTCCAAGGATCTTAGATGGCTGTACTGGCATGGATTTCCATCAACTTACACTCCTACAGAGTTTCAGCAAGGAAGTCTAGTTTCCATCGAATTAAAATATAGTAATCTCAAACAACTATGGAAGAAGAGCCAGATACTAGAGAATCTAAAAATTCTTAATCTTAGTCATTCTCGGGATTTGTCTGAAACCCCAGACTTTTCATTCTTGCCTAATCTTGAAAAGCTAGTTCTCAAAGACTGTCCAAGTTTGTCTGCAGTCTCCCATAGCATTGGATCTCTCCATAAACTTCTTCTAATAAACTTGACAGACTGCACAGGGCTTCAGAAACTTCCGAAAAGCATCTATAAATTAAAATCTCTAGAATCTTTGATTCTTTCAGGATGTTCCATGATTGACAAATTGGAGGAGGACTTGGAACAGATGGAATCCTTGAAAACCTTGATTGCGGATAAGACTGCTATAACAAAAGTGCCCTTTTCAATAGTAAGATTAAGAAACATTGGATATATTTCTATATGTGGCTTTGAAGGATTTTCACGTGATGTATTTCCTTCTCTCATTCGGTCTTGGTTGTCTCCATCAAGTAATGTGATATCCCTAGTTCAAACATCTACATCTATGTCATCTCTTGGTACTTTCAAGGACCTTCTTAAGCTTCGAAGTCTTTGTGTGGAGTGTGGCTCAAAACTACAACTTACTCAAGATGTTGCAAGAATTTTGGATGCATTAAAAGCCACAATTTTTCATAAATATGAAGCAAATGCAAGTGCAAATGCATCACAAATCTCTGATATGTATGCTTCTCCTTTAATTGATGATTGCCTCGGTCAAGTTCCCATTTCAGGGTCAAATAATTACTTGAAATCTCTCTTATTTCAAATGGGAACGAAATGCCAAGTCTCTAATAGTATGGAAGACGGTATTTTTCAGACTGCAGATGCATCTTGGGATTCATTTGTGCTCCCCTGTGACAATAATTTTGATTGGTTAACCTTTCGTTGCAAAGGTTGTTGCATAATGTTTGATCTCCCAACAATGAAGGGGCGTAACCTAAAGAGTATGATGTTGTTCGTCACCTATTACTCTTCCCCGGACAACATCATATTAGAAGGTTGCCAAGGTGTGTTGATCATAAATTACACAAAGGCAACCGTTCAGGTCTATAAAATAGATACGCTAACCTCCTTTGAAGATGAGGATTGGCAGAGCATAACATCAAACCTAGAACCTAGTAACAAAGTGGAGGTTATGGTTGTTTTTGGGGAAGGATTCACTGTAGTTCAGACAACAGTATCTCTCTTATATGATGTACCGATCGACAAAGAAATGGAACACTGCAATGCAGTATACAGGGAGGATGTTATTGTTTCTAGTGACGACGACAACAATGTTAATGATTATATTAATGCGCCGGTGGATAACAATGTTATTAGACCTGGGGAAGATGAAAATGTAGGTGAAGATAAGCACTCACATGCAGTGGATAAGAATTCTTTTGTTTCTCGTGATGATGTCATGGCACCAAATATGGATTATGCTGTCCCTGGTGGCGGTGATATGCCAGCAGATAAAGTTGTTTCCATTTCTAATGAAAATGTGAGTGATAGTAAGAACGGCGATGCTAATGCTTCTTGTAAAGCAAACAAGAATGTTTCTAGTGGAGATAAAAATAGAATTTGTCGACTCTTCATCAAGCTTCCTTCCCTTGTTCGTGCTGCTTTGATTTCACGGCCTTTCTGGTTCGGTCTGGTTTCCATTCTGGTTTGGATCACTTGCTGTGATTCTAAGAAGCGAAGTAGTCGAAACCTCTGCACAAGATATATACAAAGGGGTAAATGGCTAGTGGATTGCGCGCAAAAGTTTATTACATACAAGAAGGCCAACAAAGACCACATTCTCAGCCATTTGCAGAGTTAA 5232 0.3857 MSSFTSSSKRREKLKSTASSTTTTNPKRKRYNVYLSFCDEDATYFATEIYWALSIKARFNVFWDDEKLGSGNREIPTSVLNVIGDCKVAVIVFSRNYVNSRSCIQEFEKITECCLTTGGLIVLPVLYDGLNNYSAIGTSGEAFHDFVHRIWIKENESSSKEEDKFMSWVAAITKATTYSGLIDFADSYGREYIKDVVESVTRAVKKKRDLLGVFYTVSVKSSVQDVIQLLKQSRSPLLLGIWGMAGIGKSTIAEAIYNRIGPYFEHKYLLDNVREFWKRDGGPVSLQKKLLSYRGIPTEMQIGTIESGKVILKERLQHKRVLLVLDNVDKLEQLKSLCGSWDWFGPGSKIIITTRDRHLLKEHGVDHIYTVKELEERESIELFNQCAFSQATTPQEGFGELSRQLVTYSRGLPFALKALGGFLHGKEVLEWKSVWSSLERFSFPDQEVLQALETSFDDLSDEEKQIFLDIACFFNGMDKNDVLHTLNRSTQCTDLQISLLEDKSLLAIDENNKLQMHVLLQAMAKYIIKMESSNKTDQPKMYDVFLSFRGEDSRVKFMSHLYSSLQNAGIHAFRDDNEIQRGDQISISLLRAIGQSRISIIILSTNYANSRWCMLELVKIMEIGRTRGMVVMPVFYDVNPSEVRHQDGQFGKAFKDLISKISVDESTKSHWRRDLIDIGGTAGFVLVDSRNESADIKNIVEHVIRLLDRTDLFVAEHPVGVESRVEAATKLLNIQESDVLLLGIWGMGGMGKTTIAKSIYNQIGSKFEGRSFILNIREFWETNNNLASLQQQVLCDVYKTATFKIRDIESGKNIFKERLAQNRVLVVLDDVNELDQVKALCGSREWFGPGSRIIITTRDMHLLRSCSVDQVYKIEEMGESESLELFSWHAFKQPSPTKAYAAHSADMIAYSGRLPLALQVLGSYLSDCEITEWHKVLYKLKCIPHDEVHKKLKVSFDGLKDVTEKQIFLDIACFFIGMDKNDVIQILNGCGFFPDIGIKVLIERTLVTVDHRNKLRMHELLRDMGRQIVYEESPFDPEKRSRLWRREEVFDILSKYKGTEAVKGLALEFPRENTVCLNTKAFKKMNKLRLLQLSGVQLHGDFKYLSKDLRWLYWHGFPSTYTPTEFQQGSLVSIELKYSNLKQLWKKSQILENLKILNLSHSRDLSETPDFSFLPNLEKLVLKDCPSLSAVSHSIGSLHKLLLINLTDCTGLQKLPKSIYKLKSLESLILSGCSMIDKLEEDLEQMESLKTLIADKTAITKVPFSIVRLRNIGYISICGFEGFSRDVFPSLIRSWLSPSSNVISLVQTSTSMSSLGTFKDLLKLRSLCVECGSKLQLTQDVARILDALKATIFHKYEANASANASQISDMYASPLIDDCLGQVPISGSNNYLKSLLFQMGTKCQVSNSMEDGIFQTADASWDSFVLPCDNNFDWLTFRCKGCCIMFDLPTMKGRNLKSMMLFVTYYSSPDNIILEGCQGVLIINYTKATVQVYKIDTLTSFEDEDWQSITSNLEPSNKVEVMVVFGEGFTVVQTTVSLLYDVPIDKEMEHCNAVYREDVIVSSDDDNNVNDYINAPVDNNVIRPGEDENVGEDKHSHAVDKNSFVSRDDVMAPNMDYAVPGGGDMPADKVVSISNENVSDSKNGDANASCKANKNVSSGDKNRICRLFIKLPSLVRAALISRPFWFGLVSILVWITCCDSKKRSSRNLCTRYIQRGKWLVDCAQKFITYKKANKDHILSHLQS* 1744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0853 1743 SMART till_3 30 182 IPR000157 GO:0007165
Tpr4g0853 1743 SMART till_3 541 681 IPR000157 GO:0007165
Tpr4g0853 1743 Gene3D Ribonuclease Inhibitor 1063 1375 IPR032675 -
Tpr4g0853 1743 SMART AAA_5 235 374 IPR003593 -
Tpr4g0853 1743 SMART AAA_5 738 875 IPR003593 -
Tpr4g0853 1743 Gene3D - 536 714 IPR035897 -
Tpr4g0853 1743 Coils Coil 1236 1256 - -
Tpr4g0853 1743 SUPERFAMILY "Winged helix" DNA-binding domain 447 532 IPR036390 -
Tpr4g0853 1743 Gene3D - 373 460 IPR042197 -
Tpr4g0853 1743 Gene3D - 877 960 IPR042197 -
Tpr4g0853 1743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 712 971 IPR027417 -
Tpr4g0853 1743 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 180 IPR035897 -
Tpr4g0853 1743 SUPERFAMILY Toll/Interleukin receptor TIR domain 532 657 IPR035897 -
Tpr4g0853 1743 Gene3D - 715 874 IPR027417 -
Tpr4g0853 1743 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 550 1539 - -
Tpr4g0853 1743 PANTHER RCT1-LIKE RESISTANCE PROTEIN, PUTATIVE-RELATED 40 534 - -
Tpr4g0853 1743 MobiDBLite consensus disorder prediction 1 23 - -
Tpr4g0853 1743 Pfam TIR domain 31 168 IPR000157 GO:0007165
Tpr4g0853 1743 Pfam TIR domain 542 704 IPR000157 GO:0007165
Tpr4g0853 1743 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 550 1539 IPR044974 GO:0006952
Tpr4g0853 1743 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 40 534 IPR044974 GO:0006952
Tpr4g0853 1743 PRINTS Disease resistance protein signature 741 756 - -
Tpr4g0853 1743 PRINTS Disease resistance protein signature 818 832 - -
Tpr4g0853 1743 PRINTS Disease resistance protein signature 911 925 - -
Tpr4g0853 1743 PRINTS Disease resistance protein signature 1149 1165 - -
Tpr4g0853 1743 SUPERFAMILY L domain-like 1016 1330 - -
Tpr4g0853 1743 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 219 470 IPR027417 -
Tpr4g0853 1743 Gene3D - 204 367 IPR027417 -
Tpr4g0853 1743 Gene3D - 29 203 IPR035897 -
Tpr4g0853 1743 Pfam NB-ARC domain 725 944 IPR002182 GO:0043531
Tpr4g0853 1743 Pfam NB-ARC domain 221 444 IPR002182 GO:0043531
Tpr4g0853 1743 ProSiteProfiles TIR domain profile. 540 689 IPR000157 GO:0007165
Tpr4g0853 1743 ProSiteProfiles TIR domain profile. 29 158 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0853 Tpr-Chr4 8027177 8038273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0853 80 544 WRKY Transcription Factor Family AT4G12020 27.813 1.20e-37 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0853 - - cam:101511908 2473.35