Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0848 ATGGCTCCTCAACACCGCCGTTCTTCCTCAGCAACTCTGTTTGGGAGGATGACACAAAGTTTCCGTGGAGCTCCAGCGGGAGTCAATATTTCCTTAATCAATGGTAGCATGAATGGGGGAGTAGATACATTAAGACAGGTTGAGGCCAAGTACCCAGCTCTGCTTTTCAAACAGCAGCTTACAGCTTATGTGGAAAAGATATATGGAATGATTCGAGATAACTTGAAGAAAGAAATTTCTCCTTTGCTTGGATTATGCATCCAGGCACCAAGAACATCCAGAGCAAGCTTAGTTAAGGGGTCATCACGTTCAGTTGCAAACACTGAAGCGCAAAAGGCCCTGATTGCTCACTGGAAGGGAATAGTCAAGAGCCTTGGGAACTTCTTAAATACTTTGAAAGCAAATAATGTATAG 414 0.4372 MAPQHRRSSSATLFGRMTQSFRGAPAGVNISLINGSMNGGVDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVANTEAQKALIAHWKGIVKSLGNFLNTLKANNV* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0848 137 PANTHER MYOSIN 1 137 - -
Tpr4g0848 137 ProSiteProfiles Dilute domain profile. 38 137 IPR002710 -
Tpr4g0848 137 PANTHER BNAA08G26800D PROTEIN 1 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0848 Tpr-Chr4 7966260 7967718 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0848 1 137 Myosins gene family AT1G08730 86.861 1.04e-78 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0848 K10357 - csv:101206606 251.521