Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0833 ATGTCTCTCTATTGGGGAAAAGATGCTATAGTACTTTTTCCAGAGTGGCCTAACCAAAGTGTTAGCATGTATTTCTTAGCTATCTTGTTTGTGTTTTTTCTTGGAATGGTTATTGAGTTGTTGCCTAACCAACCTACCATCAAGCAAGGGACAAATCATATTAAGGGAGGGTTGATTCAAGCTATCATATACTTCTTTCGTATTATTTTCCATTACTTTGTGATGCTTGCTGTTATGTCTTTCAATATAGGAATTTTCATTGCTGCTGTTGCTGGTCATACATTGGGATTCTTTTTAGTCAAGTCTCGTGCTATTTATGTTGCCAACAAAAAACAAAATCTTGAGTCCTCCGTCGCTATTGATGAAATTTAG 372 0.3602 MSLYWGKDAIVLFPEWPNQSVSMYFLAILFVFFLGMVIELLPNQPTIKQGTNHIKGGLIQAIIYFFRIIFHYFVMLAVMSFNIGIFIAAVAGHTLGFFLVKSRAIYVANKKQNLESSVAIDEI* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0833 123 PANTHER CTR FAMILY COPPER TRANSPORTER 1 116 - -
Tpr4g0833 123 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 116 IPR007274 GO:0005375|GO:0016021|GO:0035434
Tpr4g0833 123 Pfam Ctr copper transporter family 50 99 IPR007274 GO:0005375|GO:0016021|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0833 Tpr-Chr4 7791196 7791567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0833 1 115 Inorganic Solute Cotransporters AT5G59040 40.000 2.64e-26 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0833 K14686 - gmx:100808693 158.303