Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0832 ATGGCTATTGTAAATCAACAACCTCAACAAGATGAACAATTTTCTCCACAGAAGAAGAAGAAACCACCTACTGAGGATGAGAAAAGGAAGGAGAAAATTGTAGCTGGGAGTTTGATGAAAGCTTTGATGAGACCTGGTGGTGGTGATTCTGGACCTTCAGATGGTGATCAGGTTATCTATCACTGCACAATTCGAACTTTGGATGGAGTAGTTGTGGAATCTACCCGATCTGAACATGGAGGCAAGGGCATACCGATAAGACATGTATTGGGTAAAAGCAAGATGCTATTGGGCTTGCTAGAAGGAATTCCATCTATGTTGAAGGGTGAAGTGGCAATGTTCAAGGTGAAGCCTCAGTTGCATTATAGTGAGGATGATTGCCCTATTTCTGCTCCTGATGGTTTTCCTAAGGATGATGAACTCCATTTTGAAATTGAGCTGATAGAGTTTTTCAAGGCCAAGGTTGTCACTGAAGATTTGGGAGTGGTTAAAAAGGTTGTACGTGAAGGGCAAGGCTGGGAATGTCCAAGAGAACCTTATGAAGTGAAGGCTTGGATTTCAGCGAAGACAGTTACTGGGAAATTGATCATGTCACACACAGAAGGAGAACCCTATTTCTTTACATTTGGAAAATCAGAGGTACCCAAAGGTCTTGAAATGGGGATTGGAACAATGGTTCGGGAAGAGAAAGCTGTTATATATGTTACAAGTCAGTATTTAACCGAGTCTCCTCTGATGCCTGTTATAGAAGATTCTGAAGTCCAGTTTGAAGTGGAGCTTGTTCACTTTATTCAAGTGCGGGACGTGCTTGGAGATGGGCGCCTGGTAAAACGTCGGATTCGTGATGGAAAAGGTGATTTTCCAATGGATTGCCCCCTTCATGACAGTCTACTTCATGTTCATTACAAGGGCACCGTTCTCAATGAAGAAAAGAGGGTGTTCTATGACACAAGAGTTGATAACGACGGTAAACCGTTGGATTTCTGTTCTGGAGAAGGGCTGGTACCAGAGGGATTTGAATTGTGTGTTCGTCTGATGCTACCAGGAGAGATGGCTCTTGTCACATGTCCGCCAGACTATGCTTATGATAAGTTTCCAAGGCCTTCAAATGTCCCTGAGGGTGCTTATATTCAATGGGAAATTGAGCTTCTATCTTTTGAAATGCCAAAGGACTGGACAGGCATGGACTTTAAAAGTATAATGAACGAAGCTGAAAATATCAGAAACACGGGTAACAGGTTATTCAAAGAAGGAAAATATGAACTTGCAAAGGCAAAGTATGAAAAGGTGCTTCGTGAATTTAATCATGTTAATCCACAAGATGACGACGAAGGAAAAGTTTTTGCAGATACACGTAATTTGCTATACCTGAATGTTGCTGCATGCTATCTGAAGTTCGGAGAATGCAGAAAGTCCATTGAGACATGTAATAAGGTTTTAGAAGCAAATCCTGCGCACGTCAAGGGTCTTTATCGTCGTGGAATGGCCTATATGGGTAATGGAGATTTTGATGAAGCAAGGGCTGATTTCAAAATGATGATAAAGGTCGATAAATCAACTGAATCAGATGCAACTTCCGCTCTTTTAAAACTGAAGCAGAAAGAGCAGGAAGTTGAGAAAAAAGCTCGGAAACAATTTAAAGGGCTATTTGACAAGAAGCCTGGAGAAATAGCAGAAGTTAAAGCTAATGAAGATGAAGGTCAAGTCACAAGTGAAAGCCAGAAAGATGGTGCGGTACAGGGAGACTCATCGGATGAAACGAATTCGGAGGATTCACATGAAGATGCACCTCTTATAGCAGATCGAAGGGGTTGGTTCTCTTACTTTTGGCCTACTGGTAGTAGAATCTTTTCATCTCTTGGGCTTCAAAGATGTACCATACTATAA 1887 0.4171 MAIVNQQPQQDEQFSPQKKKKPPTEDEKRKEKIVAGSLMKALMRPGGGDSGPSDGDQVIYHCTIRTLDGVVVESTRSEHGGKGIPIRHVLGKSKMLLGLLEGIPSMLKGEVAMFKVKPQLHYSEDDCPISAPDGFPKDDELHFEIELIEFFKAKVVTEDLGVVKKVVREGQGWECPREPYEVKAWISAKTVTGKLIMSHTEGEPYFFTFGKSEVPKGLEMGIGTMVREEKAVIYVTSQYLTESPLMPVIEDSEVQFEVELVHFIQVRDVLGDGRLVKRRIRDGKGDFPMDCPLHDSLLHVHYKGTVLNEEKRVFYDTRVDNDGKPLDFCSGEGLVPEGFELCVRLMLPGEMALVTCPPDYAYDKFPRPSNVPEGAYIQWEIELLSFEMPKDWTGMDFKSIMNEAENIRNTGNRLFKEGKYELAKAKYEKVLREFNHVNPQDDDEGKVFADTRNLLYLNVAACYLKFGECRKSIETCNKVLEANPAHVKGLYRRGMAYMGNGDFDEARADFKMMIKVDKSTESDATSALLKLKQKEQEVEKKARKQFKGLFDKKPGEIAEVKANEDEGQVTSESQKDGAVQGDSSDETNSEDSHEDAPLIADRRGWFSYFWPTGSRIFSSLGLQRCTIL* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0832 628 SUPERFAMILY FKBP-like 155 263 - -
Tpr4g0832 628 Coils Coil 524 544 - -
Tpr4g0832 628 SMART tpr_5 404 437 IPR019734 GO:0005515
Tpr4g0832 628 SMART tpr_5 453 486 IPR019734 GO:0005515
Tpr4g0832 628 SMART tpr_5 487 520 IPR019734 GO:0005515
Tpr4g0832 628 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 296 384 IPR001179 GO:0003755
Tpr4g0832 628 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 181 261 IPR001179 GO:0003755
Tpr4g0832 628 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 52 148 IPR001179 GO:0003755
Tpr4g0832 628 Gene3D Tetratricopeptide repeat domain 397 552 IPR011990 GO:0005515
Tpr4g0832 628 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 55 151 IPR001179 GO:0003755
Tpr4g0832 628 Pfam Tetratricopeptide repeat 488 515 IPR019734 GO:0005515
Tpr4g0832 628 MobiDBLite consensus disorder prediction 14 32 - -
Tpr4g0832 628 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 295 387 IPR001179 GO:0003755
Tpr4g0832 628 SUPERFAMILY TPR-like 401 543 IPR011990 GO:0005515
Tpr4g0832 628 Gene3D - 3 153 IPR046357 GO:0003755
Tpr4g0832 628 Gene3D - 265 391 IPR046357 GO:0003755
Tpr4g0832 628 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE PASTICCINO1 72 574 IPR031135 GO:0030154|GO:0042761|GO:0099402
Tpr4g0832 628 Gene3D - 154 264 IPR046357 GO:0003755
Tpr4g0832 628 MobiDBLite consensus disorder prediction 1 32 - -
Tpr4g0832 628 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 72 574 - -
Tpr4g0832 628 SUPERFAMILY FKBP-like 269 395 - -
Tpr4g0832 628 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 179 264 IPR001179 GO:0003755
Tpr4g0832 628 SUPERFAMILY FKBP-like 31 155 - -
Tpr4g0832 628 MobiDBLite consensus disorder prediction 561 596 - -
Tpr4g0832 628 ProSiteProfiles TPR repeat profile. 487 520 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0832 Tpr-Chr4 7780709 7790716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0832 52 552 Calmodulin-binding Proteins AT5G48570 29.688 7.07e-60 208
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0832 - - gmx:100818201 1072