Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0826 ATGGCCAAAGTTGAAGGAGAAGTTCAATTGTTAGGTGTAGGAGGAAGCCCATTTGCTAGAAGGGTGCAAATTGCTCTAAAATTGAAGGGTATTGAATACACTTACATTGAAGAAAATTTAAGGAACAAAAGTGATCTTCTTCTTAAGTACAACCCTATTCACAAGAAGGTGCCTGTTTTAGTTCACAATGGGAAACCCATAGTTGAGTCTCTTGTGATCCTTGAATACATTGATGAAACATGGGAGAATTATCCAATTTTTCCTCAACAACCTTATGAGAAAGCATTGGCTCGATTTTGGTCTAGGTTCATTGATGACAAGATCCTGCCAGCAATATCAAAGGCTGCATGGACAGTGAACAAAGAAGAACGTGAGAAAGGCATTGAAGAATCATTGCAAGCTCTACAATTTCTTGAGAATGAACTCAAGCACAAATTCTTTGGTGGAGAAAGTATTGGCATTGTGGATATTGCTGCTTCTTACTTAGCTTTCTGGCTCCCTGTGGTTGAAGAAGCTGTAGAATTGAAGTTGCTTACCAGTGACAAGTTTCCAAAGCTTCATAAATGGAGTCAAGAATTCATCAATCATCCTATTGTGAAAGAGAATCTTCCTCCTAAACAAGGACTCTTAGGATTTTTCAAATCTCGGTATGCAGCGATTAGCGCTGCTTCGAAATAG 678 0.3879 MAKVEGEVQLLGVGGSPFARRVQIALKLKGIEYTYIEENLRNKSDLLLKYNPIHKKVPVLVHNGKPIVESLVILEYIDETWENYPIFPQQPYEKALARFWSRFIDDKILPAISKAAWTVNKEEREKGIEESLQALQFLENELKHKFFGGESIGIVDIAASYLAFWLPVVEEAVELKLLTSDKFPKLHKWSQEFINHPIVKENLPPKQGLLGFFKSRYAAISAASK* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0826 225 CDD GST_N_Tau 8 81 - -
Tpr4g0826 225 SUPERFAMILY Thioredoxin-like 8 108 IPR036249 -
Tpr4g0826 225 Gene3D - 90 224 - -
Tpr4g0826 225 Pfam Glutathione S-transferase, C-terminal domain 103 197 IPR004046 -
Tpr4g0826 225 Pfam Glutathione S-transferase, N-terminal domain 8 79 IPR004045 -
Tpr4g0826 225 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 6 85 IPR004045 -
Tpr4g0826 225 Gene3D Glutaredoxin 1 89 - -
Tpr4g0826 225 SUPERFAMILY GST C-terminal domain-like 79 217 IPR036282 -
Tpr4g0826 225 CDD GST_C_Tau 91 216 IPR045074 GO:0004364|GO:0006749
Tpr4g0826 225 SFLD Main.3: Omega- and Tau-like 5 223 IPR045073 -
Tpr4g0826 225 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 1 220 IPR045073 -
Tpr4g0826 225 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 1 220 - -
Tpr4g0826 225 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 90 217 IPR010987 -
Tpr4g0826 225 SFLD Glutathione Transferase (cytosolic) 5 223 IPR040079 -
Tpr4g0826 225 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0826 Tpr-Chr4 7724771 7728427 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0826 5 222 Glutathione S-transferase Gene Family AT3G09270 50.679 3.30e-81 240
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0826 K00799 - gmx:100819805 358.221
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0826 4 7724771 7728427 Tpr4g0826 4 7724771 7728427 ECH