Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0825 ATGGCTCCTGCAAATGAAGAAGAAGAAGTGAGACTATTAGGAAAATGGCCAAGTCCATTTAGCAACAGAGTAGTTCTTGCTTTAAAACTCAAAGGTGTTGAATACAAATACTCAGAAGAAAATCTAGCTAATAAAAGTGATGATCTTCTTAAATACAACCCTGTTTATAAGAAGGTACCTGTTCTTGTTCACAATGGAAATCCAATAGCTGAGTCTCTTGTCATTCTTGAATATATAGATGATACATGGACAAATAATTCATTTTTGTCCCAAGATCCTTATGAGAGAGCTTTGGCTCGGTTTTGGTCTAAGACTCTTGATGACAAGATTTTGCCTGCAATATGGAATGCATGCTGGAGCGACGAAAAAGGGCGCGAGAAAGCTGTGGAGGAAGCCTTGGAAGCTCTAAACATACTAGAGAATGAAATCAAAGACAAGAAATTCTTTGGTGGAGAAACCATAGGACTTGTTGATATTGCTGCAAATTTCATTGGTTATTGGGTTGAAATATTACAAGAAATTGCAGGATTGGAGTTACTTACCGTTGAAAAATTCCCAAAGGTATTTAAATGGAGTCAAGAATTTATCAATCACCCTGTTATCAAGGAAGGGTTACCTCCTAGAGATGAATTATTTGCTTTTTTCAAGGCTTCTGCTTCAAAAAAGTAG 669 0.3662 MAPANEEEEVRLLGKWPSPFSNRVVLALKLKGVEYKYSEENLANKSDDLLKYNPVYKKVPVLVHNGNPIAESLVILEYIDDTWTNNSFLSQDPYERALARFWSKTLDDKILPAIWNACWSDEKGREKAVEEALEALNILENEIKDKKFFGGETIGLVDIAANFIGYWVEILQEIAGLELLTVEKFPKVFKWSQEFINHPVIKEGLPPRDELFAFFKASASKK* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0825 222 SUPERFAMILY Thioredoxin-like 10 110 IPR036249 -
Tpr4g0825 222 Coils Coil 122 142 - -
Tpr4g0825 222 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 92 215 IPR010987 -
Tpr4g0825 222 Pfam Glutathione S-transferase, N-terminal domain 9 80 IPR004045 -
Tpr4g0825 222 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 8 87 IPR004045 -
Tpr4g0825 222 Gene3D - 92 222 - -
Tpr4g0825 222 SFLD Glutathione Transferase (cytosolic) 6 220 IPR040079 -
Tpr4g0825 222 CDD GST_N_Tau 10 83 - -
Tpr4g0825 222 Pfam Glutathione S-transferase, C-terminal domain 106 199 IPR004046 -
Tpr4g0825 222 Gene3D Glutaredoxin 3 90 - -
Tpr4g0825 222 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 6 218 - -
Tpr4g0825 222 CDD GST_C_Tau 93 217 IPR045074 GO:0004364|GO:0006749
Tpr4g0825 222 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 6 218 IPR045073 -
Tpr4g0825 222 SFLD Main.3: Omega- and Tau-like 6 220 IPR045073 -
Tpr4g0825 222 SUPERFAMILY GST C-terminal domain-like 81 218 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0825 Tpr-Chr4 7721111 7723151 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0825 5 217 Glutathione S-transferase Gene Family AT3G09270 59.070 1.62e-90 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0825 K00799 - gmx:547582 377.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0825 4 7721111 7723151 Tpr4g0825 4 7721111 7723151 ECH