Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0807 ATGGCGCAAGGAACAGGAAGGAGTAGTAGAATTGTTGGAGATTATGTAGTTGGGAAGCAAATTGGAGCAGGTTCGTTTTCAGTTGTGTGGCATGCGAGACACAAAGTTCATGGAACAGAAGTTGCTATCAAAGAAATCGCTACTCTTAAACTTAATAAGAAGTTGCAAGAGAGTCTTATGTCTGAGATTTTCATCTTGAAGCGTATTAATCATCCTAATATTATCTCTTTGCATGATATAATTCAGGCTCCTGGGAAGATACATCTTGTGTTGGAGTACTGTAAAGGGGGAGATCTTTCTTTGTACATTCAACGTCATGGACGGGTACCAGAGGCAACTGCCAAGCATTTTATGCTTCAGCTGGCTGCTGGTCTACAAGTTCTTCGGGACAATAACCTTATTCATCGAGATCTGAAACCACAGAATCTTCTTCTCTCCAGAAATGATGAGAAGGCAGTGCTGAAGATCGCTGACTTTGGATTTGCAAGATCTCTGCAACCGAGGAACCTTGCAGAAACATTATGTGGTTCACCACTCTACATGGCTCCAGAAATCATGCAATTGCAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGAGCTATCTTATATCAGTTTGTTACAGGGAAAACACCTTTCACTGGAAACAATCAAATTCAGTTACTACAGAATATTATGAAATCAACAGAATTGCAATTTCCATCTGATAGCCAAAGTTTGAGTTCTGAGTGCAAAGATTTGTGTCAGAAATTACTACGCCGTAACCCAGTGGAACGTCTAACATTTGAAGAATTCTTTAACCACCCATTCCTTAATCCAAAGCAAACAGAACAGGATGAACCGTTAAGGAATAAAAGCTCTTCAAGGCTGGTAGGTGGGTTCTCTTCAACGGTGACTGACCCTTTGAGAAGAACCGAGGAAAATTATCAAGAGGATTGCTTACCTTTCATTCTAGATGATGATTCCAGTGGACCTGAAAGAAGTACATTGTTTTCAAAGAAGTCCTCAATTAAGTCTACCTTTGGATTTGATCTAAATAGAAAACAAGATAAAGCAGAGCCAACTTCTATTTCTAATAATGTAAATTGTGCTTCCAGATATAGTGGTGTAACACATAGACCTGAAAACACTTCTAAAAGATTGGACAACCATAAAATTTTAGGAAGAAATCTCACTAGTCCTCTAGGATCTCCTGAACAGTTATTTGCAAACCCTTATCCAAAAGTTACAGATTCACTTGAGAATATTGATCAAGAATATGTTCTTGTGTCTGGTCCCCCTATGGATGTTTCATCTTCTTCAGTGAATGCTTCAAAGCCCAGCCATTCCTTATTTAGGTCAGGTAGTTTCCCCCAAGAGTCTTCTAATACAATCACTAGATTAAGTGCTCCAATGCAAATCGTTGGTGCATCTACCAATAGCATGTGTCAAATCGGAAGTTCAGGTAGTCAGGACTCTGCTCCTGGGACTTCACATGGATCAATGGATACCGGTGATGAACAGCCATCAACTAACTGCATGACAAGAGTAAAATCATTGCAACAGTATGCATCTGCCATCACAGAATTAGTTAATGAAAAGATTGAGGCAAGAAAGCAGCTAGAAGCATTTTCTATTCAGCTTGTAATTCTTGCCATTTGGAAGCAAGCACTACACATATGCCATACACAGGCTGCCTCAGCAATGGAAGGAAGTCCAAGCCAAGAAGCTTCAAGATATAGAAGGAGCACCAGCAAGAAACATGGTAGTCCCGATTCGGAAGAATGTCTTGATGAAAACACCCAGGTGCCGAAGGACTTATTATCTCAAATTGAAAGTGATTTTTTGAGGGAATTTGAGCATGCCGAAGAACTTGCTAAGACCATTGAGCCTGGAAATACAGAAATGCCAGATGCAATGGAGACAATATTTCAATCCGCCCTTGCTTTTGGGAGACATGGGGGTGTAGAAGAGCTTATGGGTGATACAGAAAGTGCAGCTGCATTGTATTCAAAAGCCGTCCGTCTATTGGTTTTCCTTCTAGTGGAAGGACCGTCTCTGATCCTCAACCCTCCATTTTCATTGACAAACTCAGACCGTTACAGGCTTCGGAATTACATTGATATTCTTAATAACAGACAAGGTTATTCAAGGTCTCAGAGAATGACACTTCTTAAGGGTGATGATAGTCAAGGCATCTTTAAGGAAAAGTTTTAG 2199 0.4038 MAQGTGRSSRIVGDYVVGKQIGAGSFSVVWHARHKVHGTEVAIKEIATLKLNKKLQESLMSEIFILKRINHPNIISLHDIIQAPGKIHLVLEYCKGGDLSLYIQRHGRVPEATAKHFMLQLAAGLQVLRDNNLIHRDLKPQNLLLSRNDEKAVLKIADFGFARSLQPRNLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGAILYQFVTGKTPFTGNNQIQLLQNIMKSTELQFPSDSQSLSSECKDLCQKLLRRNPVERLTFEEFFNHPFLNPKQTEQDEPLRNKSSSRLVGGFSSTVTDPLRRTEENYQEDCLPFILDDDSSGPERSTLFSKKSSIKSTFGFDLNRKQDKAEPTSISNNVNCASRYSGVTHRPENTSKRLDNHKILGRNLTSPLGSPEQLFANPYPKVTDSLENIDQEYVLVSGPPMDVSSSSVNASKPSHSLFRSGSFPQESSNTITRLSAPMQIVGASTNSMCQIGSSGSQDSAPGTSHGSMDTGDEQPSTNCMTRVKSLQQYASAITELVNEKIEARKQLEAFSIQLVILAIWKQALHICHTQAASAMEGSPSQEASRYRRSTSKKHGSPDSEECLDENTQVPKDLLSQIESDFLREFEHAEELAKTIEPGNTEMPDAMETIFQSALAFGRHGGVEELMGDTESAAALYSKAVRLLVFLLVEGPSLILNPPFSLTNSDRYRLRNYIDILNNRQGYSRSQRMTLLKGDDSQGIFKEKF* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0807 732 Pfam Protein kinase domain 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0807 732 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 708 IPR045269 GO:0004674|GO:0006914
Tpr4g0807 732 PANTHER SERINE/THREONINE-PROTEIN KINASE ATG1C-LIKE 1 708 - -
Tpr4g0807 732 MobiDBLite consensus disorder prediction 559 594 - -
Tpr4g0807 732 ProSiteProfiles Protein kinase domain profile. 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0807 732 ProSitePatterns Serine/Threonine protein kinases active-site signature. 133 145 IPR008271 GO:0004672|GO:0006468
Tpr4g0807 732 MobiDBLite consensus disorder prediction 574 594 - -
Tpr4g0807 732 SUPERFAMILY Protein kinase-like (PK-like) 11 432 IPR011009 -
Tpr4g0807 732 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Tpr4g0807 732 Gene3D Transferase(Phosphotransferase) domain 1 6 318 - -
Tpr4g0807 732 MobiDBLite consensus disorder prediction 479 505 - -
Tpr4g0807 732 SMART serkin_6 15 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0807 732 CDD STKc_ATG1_ULK_like 21 271 - -
Tpr4g0807 732 Coils Coil 514 541 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0807 Tpr-Chr4 7482872 7491015 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0807 1 272 CBL-interacting serine-threonine protein kinases AT2G30360 36.559 2.69e-53 188
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Tpr4g0807 Pkinase 1.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0807 K08269 - gmx:100791596 1255.74