Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0789 ATGGGGTGTTTTACTATATTGAAGAGAAATAAGAAAAAGTCTGATCAGATTGCGTATGTAAAACGCGTAAGCCCTGGCGAGGATTCTCCTACAGTACTTCCTGAACCCCAAACTCATACTCGCTCACTCCAGTCTGCGCCTCCTAGTTTTAAGATAAGAGTGAAACCAATTCAACCTACTAATAATAAAGTCACTAACAATAGATCAACTAGAATACGAGCTTTGTCTGCTCCATCGGCTCTTGATGAAGCAGAACAAGATGCATTGGCCATAATTGAGTATGAGGGACAAGAAGACTCAAAATACCGAACTGGATCATGGAAGGAGCAGCGCACTTCTAGTCCACAACCTTTACCGCTTCCATCTCCTAAGGGTAGCGGTACACTGAAGACTGTTGGAAGCTTTAAGTTGGGGACAGCTAGTAGTCCCTTATATGCTTCTGGACCTTTGCCGCTTCCACCAACTGGGTCACTTCGAAACTTTTCATATGATGAACTTGCTGCCGCTTGCCTCAATTTCTCTTCAGATCGATACATGTCAGAATCTCTTTCATCCACCATCTATAAAGCTTCCTTTGGTGACGACACTTCAACTTCAAGTTCAAAGAAATTTGAAGCCACTGTCACACGCCTTCGCCCATCACCTCAGGGCCTGAAGGAATTCATAAATGAAGTTAATACTCTTGCATCTTTGGAGCATCCAAACCTCTGTAGATTGCTAGGATTTCACGCGCGTGATGGTTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGTTTGGACCGCTTATTGTATGGGAAATCTGATGGACCATCAATTGATTGGAATACAAGAATGAAAATTGCAATATGTGCTGCACTAGGTCTTTCTTTCTTGCATGAAGAAGGGCCTTTTCAGGCAATGTATAATGAATTCTCAACAGCCAACATTCAGATTGACAAAGATTTCAGTGCAAAGCTTTCAGGATATGGTTGTGTCGGACATGTTCCCAAGGAAGAGATTTCAAGCAGTTCATCTGCCGTTGGAAACCTATCGATGGAGACACTGGAGAAAGGAATGCTTACTCCAAAGAGCAACGTATGGAGTTTCGGAATTTTTCTTCTAGAGCTACTTACAGGAAGAAAGAATCTCGATAGCCGCCACCCCAAGGAAGAGAGGAATTTGGTGAAGTGGAGCAGGCCTTTCCTATCTGATGATCATCGTTTGTCAATGATCATGGATCCTCAACTCAAAGGCCGCTTTCCTTCTAAAGCGGCGAGTACAATAGCTCACATTGCACAAAGATGCCTTCAAATGGAGCCATCAGAACGACCAACCATGGGAACTGTTGTTGAGCATCTCAAAAAGATACAAGATTTGAAGCATTCTTCCAGATTCCCACTGCAAGAACCAGCACAAATGTCGAGATCACCAAGTCTTAATGGTATCATCCACCCTCCACCAAGGTCGAGTTTCTCTCCATCACCATCATCCAGAGCTCTGGTATCTGTTTCACCTCCAAGATGGTCAGGAGTGTCGATTCAACTTCCGCCTCGCGCTTTTTCTTCAACCCTCTATTTGGAGGAGCTTGATAGGCAAGAAAGTCGCAAGTTATCAGCCTCGGCCTCAACCTCAGCTTCTAGGAAGGCTAGTGTTGAAGGATTTTGA 1656 0.439 MGCFTILKRNKKKSDQIAYVKRVSPGEDSPTVLPEPQTHTRSLQSAPPSFKIRVKPIQPTNNKVTNNRSTRIRALSAPSALDEAEQDALAIIEYEGQEDSKYRTGSWKEQRTSSPQPLPLPSPKGSGTLKTVGSFKLGTASSPLYASGPLPLPPTGSLRNFSYDELAAACLNFSSDRYMSESLSSTIYKASFGDDTSTSSSKKFEATVTRLRPSPQGLKEFINEVNTLASLEHPNLCRLLGFHARDGSEHRMLVYERLYHGSLDRLLYGKSDGPSIDWNTRMKIAICAALGLSFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHVPKEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSRPFLSDDHRLSMIMDPQLKGRFPSKAASTIAHIAQRCLQMEPSERPTMGTVVEHLKKIQDLKHSSRFPLQEPAQMSRSPSLNGIIHPPPRSSFSPSPSSRALVSVSPPRWSGVSIQLPPRAFSSTLYLEELDRQESRKLSASASTSASRKASVEGF* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0789 551 PANTHER OS01G0822200 PROTEIN 49 549 - -
Tpr4g0789 551 MobiDBLite consensus disorder prediction 533 551 - -
Tpr4g0789 551 Gene3D Transferase(Phosphotransferase) domain 1 258 470 - -
Tpr4g0789 551 MobiDBLite consensus disorder prediction 528 551 - -
Tpr4g0789 551 SUPERFAMILY Protein kinase-like (PK-like) 152 460 IPR011009 -
Tpr4g0789 551 MobiDBLite consensus disorder prediction 100 127 - -
Tpr4g0789 551 MobiDBLite consensus disorder prediction 31 45 - -
Tpr4g0789 551 Gene3D Phosphorylase Kinase; domain 1 157 256 - -
Tpr4g0789 551 PANTHER OS01G0588500 PROTEIN-RELATED 49 549 - -
Tpr4g0789 551 ProSiteProfiles Protein kinase domain profile. 173 452 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0789 551 MobiDBLite consensus disorder prediction 23 45 - -
Tpr4g0789 551 Pfam Protein tyrosine and serine/threonine kinase 198 450 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0789 Tpr-Chr4 7356938 7361141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0789 152 454 Receptor kinase-like Gene Family AT4G02010 38.065 1.96e-58 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Tpr4g0789 PK_Tyr_Ser-Thr 4.6e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0789 - - gmx:100808712 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2135 6 23071393 23076168 Tpr4g0789 4 7356938 7361141 PCT