Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0751 ATGGGTTCTCAAAACTATGATCATCATGAGTATGAAGCATGTGTTTTAGAGAATGGAGGCAACATAAAGGGAATATTAACCAAGGAAATTAGTATGAAACATGGTAGAACAGCACATAACATGTCATCATCTTCATTGCGCATGAAATCTGACATAATTCTTGTCTCAAAAGTTCACTATGGAATCATTAGAAATCTTTTGGATAATTTCCAAGAAGTTATTCTTGGAACAAAGCTTTCCATTCTTTTTCCAGCCATTCCTTTTGCCATTTTAGCTCAATGCTATGGTTTTGCAAGACCTTGGGTTTTTGCATTGAGCTTACTTGGTCTTATCCCTCTTGCTGAAAGAGTCAGCTTCTTGACAGAACAGATAACTTATTACACAGGTCCCACAGTGGGAGGACTTTTGAATGCAACATGTGGGAATGCTACAGAACTCATCATAGCAATATTTGCACTTAGAAATAACAAAATTGCTGTAGTCAAGTATTCTCTACTTGGTTCCATTCTCTCCAACCTTCTTCTTGTTCTTGGAACCTCTCTATTATGTGGCGGCATTGCAAATATTAGAGCAGAACAAAAATATGACAGAAGACAATCAGATATGAACTTGTTTATGCTTCTTATGGCATTCTTGTGTCACTTACTGCCAATGTTGTTTCAATATGGTGGTGCTTCGATGGCTTTCGATGCAGACTCATCTCTGCAATTTTCAAGAGCTGCTAGCATTGTGATGGTTATTGCATATTTTGCATATCTTATCTTCCAACTATGGACTCACAGGCAATTATTTGAAGCACAAGATGAAGATGATGAAGAAAATGATTCGGAAGAAGCAGTTATAGGATTTGGGAGTGGTTTTGCTTGGCTAGTTATTATGACTGTTTTCATTGCTATTTTGTCTGAATATGTGGTTGACACAATTGAGGATGCATCGGACTCATGGGGTCTATCTGTCAGCTTCCTCAGCATAATCATGCTACCAATAGTTGGAAATGCAGCTGAACATGCAGGAGCTATCATATTTGCTTTCAAGAACAAACTGGACATCACTTTGGGTGTTGCTTTGGGTTCTGCAACTCAAATTGGAATGTTTGTGGTTCCTCTATGTGTAATTGTTTCTTGGATTCTTGGAATCAAAATGGACCTTAATTTCCACCTCCTAGAAACAGGTTCTCTTGCTATGGCAATAATAACCACAGGCTTCACATTACAGGATGGAACTTCTCACTACTTGAAAGGCCTTATTCTCTTGCTCTTGTACATTGTTATTGGGGCATGCTTTTTTGTACAAAGAACACCCTCTGACCATGCTGATATTGCTAACATAATGCTTCATTCAGCAACTGATGCCAATTTTAGAGCTTAA 1368 0.3808 MGSQNYDHHEYEACVLENGGNIKGILTKEISMKHGRTAHNMSSSSLRMKSDIILVSKVHYGIIRNLLDNFQEVILGTKLSILFPAIPFAILAQCYGFARPWVFALSLLGLIPLAERVSFLTEQITYYTGPTVGGLLNATCGNATELIIAIFALRNNKIAVVKYSLLGSILSNLLLVLGTSLLCGGIANIRAEQKYDRRQSDMNLFMLLMAFLCHLLPMLFQYGGASMAFDADSSLQFSRAASIVMVIAYFAYLIFQLWTHRQLFEAQDEDDEENDSEEAVIGFGSGFAWLVIMTVFIAILSEYVVDTIEDASDSWGLSVSFLSIIMLPIVGNAAEHAGAIIFAFKNKLDITLGVALGSATQIGMFVVPLCVIVSWILGIKMDLNFHLLETGSLAMAIITTGFTLQDGTSHYLKGLILLLLYIVIGACFFVQRTPSDHADIANIMLHSATDANFRA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0751 455 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 12 441 IPR004713 GO:0006812|GO:0008324|GO:0016021
Tpr4g0751 455 PANTHER VACUOLAR CATION/PROTON EXCHANGER 3 12 441 - -
Tpr4g0751 455 TIGRFAM cax: calcium/proton exchanger 85 429 IPR004798 GO:0006816|GO:0015369
Tpr4g0751 455 Pfam Sodium/calcium exchanger protein 101 258 IPR004837 GO:0016021|GO:0055085
Tpr4g0751 455 Pfam Sodium/calcium exchanger protein 286 424 IPR004837 GO:0016021|GO:0055085
Tpr4g0751 455 Gene3D - 280 429 IPR044880 -
Tpr4g0751 455 Gene3D - 130 279 IPR044880 -
Tpr4g0751 455 TIGRFAM caca2: calcium/proton exchanger 65 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0751 Tpr-Chr4 7019046 7023803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0751 15 437 Antiporters AT2G38170 68.765 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0751 K07300 - gmx:100782052 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2298 6 25022145 25026871 Tpr4g0751 4 7019046 7023803 PCT