Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0740 ATGGGTGTTGATTACTATAAAGTCCTTCAGGTAGATCGTAATGCCAAAGATGATGATCTCAAAAAAGCTTATCGCAAACTTGCCATGAAATGGCACCCTGATAAGAACCCTAATAACAAAAAAGATGCTGAAGCCAAATTCAAGCAAATCTCAGAAGCTTATGATGTTTTGAGTGATCCACAAAAGAGAGCTGTGTATGATCAATATGGTGAGGAGGGATTGAAGGGGCAGGTGCCTCCGCAAGGTGCGGGTGGATTTTCTGATGCCAGCGATGGGCCGACGATGTTCCGGTTCAATCCGAGAAGTGCGGATGACATATTTTCGGAGTTCTTCGGGTTTCAAAGACCCTTTGGTGGTGGAATGGGTGGTCATCCTGGTGCTTCTGGCTTTCCGAGCGGAATGTTTAGGGATGACCTTTTCTCTTCGTTTCGGAATGCGGCTGGTGAAGGATCCGGCAATGCGCCGAGGAAAAGTGCACCGATTGAGAGAACATTGCCATGCAGTTTGGAGGATTTGTATAAAGGGACCACCAAAAAAATGAAGATTTCCAGGGATGTTTCTGATTCTAGTGGGAGGCCTACCACAGTCGAGGAAATTCTAACCATTGAGATCAAGCCAGGTTGGAAGAAAGGAACAAAAATAACCTTTCCAGAGAAGGGAAATGAACAAAGAGGACTTATACCTGCAGACCTTGTTTTTATTATCGACGAGAAGCCTCATAGCCTCTTCAAGAGGGATGGCAATGATCTTGTTGTTACTCAAAAGATCTCTCTTGTAGAAGCTCTGACAGGTTACACAGCGCAAATAGCAACCCTTGACGGGAGGAATCTTACGGTCCCCGTCAACACCATCATTAGTCCATCGTATGAAGAAGTTGTTAAAGGAGAGGGTATGCCGATTCCTAAGGAACCTTCCAAAAGGGGAAACTTGAGAATCAAGTTCAACGTTAAGTTTCCATCTAGACTTACATCAGAGCAGAAGACTGGCATCAAGCGATTATTGACATCTTCATAG 1014 0.4467 MGVDYYKVLQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKDAEAKFKQISEAYDVLSDPQKRAVYDQYGEEGLKGQVPPQGAGGFSDASDGPTMFRFNPRSADDIFSEFFGFQRPFGGGMGGHPGASGFPSGMFRDDLFSSFRNAAGEGSGNAPRKSAPIERTLPCSLEDLYKGTTKKMKISRDVSDSSGRPTTVEEILTIEIKPGWKKGTKITFPEKGNEQRGLIPADLVFIIDEKPHSLFKRDGNDLVVTQKISLVEALTGYTAQIATLDGRNLTVPVNTIISPSYEEVVKGEGMPIPKEPSKRGNLRIKFNVKFPSRLTSEQKTGIKRLLTSS* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0740 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 243 328 IPR008971 GO:0006457|GO:0051082
Tpr4g0740 337 PRINTS DnaJ domain signature 6 24 IPR001623 -
Tpr4g0740 337 PRINTS DnaJ domain signature 24 39 IPR001623 -
Tpr4g0740 337 PRINTS DnaJ domain signature 42 62 IPR001623 -
Tpr4g0740 337 PRINTS DnaJ domain signature 62 81 IPR001623 -
Tpr4g0740 337 PANTHER BNAANNG28460D PROTEIN 1 336 - -
Tpr4g0740 337 ProSiteProfiles dnaJ domain profile. 4 70 IPR001623 -
Tpr4g0740 337 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 1 336 - -
Tpr4g0740 337 CDD DnaJ 4 59 IPR001623 -
Tpr4g0740 337 Gene3D - 160 238 - -
Tpr4g0740 337 Pfam DnaJ C terminal domain 161 319 IPR002939 -
Tpr4g0740 337 MobiDBLite consensus disorder prediction 73 93 - -
Tpr4g0740 337 SUPERFAMILY HSP40/DnaJ peptide-binding domain 161 240 IPR008971 GO:0006457|GO:0051082
Tpr4g0740 337 Gene3D DnaJ domain 3 122 IPR036869 -
Tpr4g0740 337 CDD DnaJ_C 159 322 - -
Tpr4g0740 337 SMART dnaj_3 3 62 IPR001623 -
Tpr4g0740 337 ProSitePatterns Nt-dnaJ domain signature. 47 66 IPR018253 -
Tpr4g0740 337 Pfam DnaJ domain 4 67 IPR001623 -
Tpr4g0740 337 SUPERFAMILY Chaperone J-domain 3 121 IPR036869 -
Tpr4g0740 337 Gene3D - 240 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0740 Tpr-Chr4 6925704 6929056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0740 5 69 C2H2 Transcription Factor Family AT1G74250 37.681 2.48e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0740 K09510 - qsu:112019781 574.704
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0740 4 6925704 6929056 Tpr4g0740 4 6925704 6929056 ECH