Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0737 ATGGAGGGTCATCATCAATTCCATCATAAAAACCAAAGACAACAACAAAATCTTCATCAAAATATTAATAGTACTACTATTAACGTCGTTGATGTTGTTGATAGATTCCCGCAATGGAGCATCCAAGAGACGAAAGAGTTTCTTACGATCCGAGCAGAGCTAGATCAAACTTTCATGGAGACTAAAAGGAACAAACAGCTATGGGATGTTATCTCCAATCATTTGAAAGAAAAGGGTTATCATAGAAGTGCAGAACAGTGCAAGTGCAAATGGAAAAATCTTGTTACTCGTTATAAGGGATGTGAGACAATGGAGACAGAAGCAATGAGACATCAATTTCCATTTTACAATGAACTTCAAGAAATTTTCACATCAAGGATGCAGAGGATGCTATGGGCGGAAGCCGAAGAAGGATCAAAGAAAAAGGCGACACAACTTTCAACCGATGACGAAGAAGAAGAAGAAAGTGAAGCAATATCTCAAAAGGGTAGAAATAGAAAGAAGAAAAAAGCTAAGATAGTTAGCGAAAGCGGCGGTAGCAGCAATAGTTTCTTCACCAATTTGAAAGAGATTTTAGATGAATTCATGAGGCAACAACTACAAATAGAAGCACAATGGATGGAAGCATTTGAAGCTAGAGAGAATGAAAGGAAGTTGAGGGAAATGGAATGGAGACAACAAATGGAAGTGTTGGAGAATGAGAGGATATTGATGGAACAAAGATGGAGAGAAAGGGAAGAACAAAGGAGGATTAGAGATGAAGCTAGGGCTGAGAAAAGGGATGCTTTAATTACAGCTTTGTTAAACAGGTTAGAAAGACAGTAA 825 0.3794 MEGHHQFHHKNQRQQQNLHQNINSTTINVVDVVDRFPQWSIQETKEFLTIRAELDQTFMETKRNKQLWDVISNHLKEKGYHRSAEQCKCKWKNLVTRYKGCETMETEAMRHQFPFYNELQEIFTSRMQRMLWAEAEEGSKKKATQLSTDDEEEEESEAISQKGRNRKKKKAKIVSESGGSSNSFFTNLKEILDEFMRQQLQIEAQWMEAFEARENERKLREMEWRQQMEVLENERILMEQRWREREEQRRIRDEARAEKRDALITALLNRLERQ* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0737 274 MobiDBLite consensus disorder prediction 138 176 - -
Tpr4g0737 274 PANTHER - 1 274 - -
Tpr4g0737 274 Pfam Myb/SANT-like DNA-binding domain 38 122 IPR044822 -
Tpr4g0737 274 Coils Coil 221 241 - -
Tpr4g0737 274 CDD GT1 37 102 - -
Tpr4g0737 274 Gene3D - 39 100 - -
Tpr4g0737 274 PANTHER TRANSCRIPTION FACTOR MYB FAMILY-RELATED 1 274 - -
Tpr4g0737 274 SMART sant 35 97 IPR001005 -
Tpr4g0737 274 ProSiteProfiles Myb-like domain profile. 39 95 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0737 Tpr-Chr4 6879267 6881427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0737 15 273 Trihelix Transcription Factor Family AT2G38250 52.963 4.95e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Tpr4g0737 Myb_DNA-bind_4 1.7e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0737 - - gmx:100791013 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0737 4 6879267 6881427 Tpr4g0737 4 6879267 6881427 ECH