Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0732 ATGGTGATGCGCAAGTCTTTCAAGGATTCTCTCAAAGCTCTTGAAGCTAACATTCAATTTGCCAATACTCTTGCTTCGGATTATCCAAGAGACAGTGATGGAGCCTGCTTTCAAATGAGATTGTCTTATAGCCCAGCTGCTCAATTTCTCCTTTTTCTGGTTAAGTGGACTGATTGCAATCTTGCCGGAGCATTAGGATTGCTTAATGTTCTCGTATACAAGGTATTTGATGATGGGAAGACAACTATGTCTGTTTGCGAAAGAAAAGCCACTCTAAAGGAGTTCTACGGTGTGATCTTGCCCTCTTTAATACAACTCCAGAGAGGAATCACGGATGTAGAAGAGAGAAAACAAAAAGATTTATGTGCTACGAAGTACAAGCCTAAAGATGTGATTAGAAAAGGAAAGATATCTCAAATTGATATAGAGAGAGAGGAAGAATGTCCTATTTGTATGGAGATGACCAACAAGGTTGTGTTACCCAAATGCAACCATTCTCTGTGTATGACATGCTATCATGACTGGCATTCAAGATCTCAATCTTGCCCTTTCTGTCGCGACAATCTTAAAAGAGTAAAGTCAGGTGACCTTTGGATCTTGATGAGTAGCTGTGATATAAGTGATTTGGAATCAATCAACAAGGAGAATTTTAAAAGGCTATTTATGTACATTGAAAAGTTGCCTCTGATTTTGCCGGAACAAGTATTCATCGCTTATCCTCAAAACTTTTGA 732 0.388 MVMRKSFKDSLKALEANIQFANTLASDYPRDSDGACFQMRLSYSPAAQFLLFLVKWTDCNLAGALGLLNVLVYKVFDDGKTTMSVCERKATLKEFYGVILPSLIQLQRGITDVEERKQKDLCATKYKPKDVIRKGKISQIDIEREEECPICMEMTNKVVLPKCNHSLCMTCYHDWHSRSQSCPFCRDNLKRVKSGDLWILMSSCDISDLESINKENFKRLFMYIEKLPLILPEQVFIAYPQNF* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0732 243 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 138 195 IPR013083 -
Tpr4g0732 243 PANTHER RING FINGER PROTEIN 41, 151 3 242 - -
Tpr4g0732 243 ProSitePatterns Zinc finger RING-type signature. 163 172 IPR017907 -
Tpr4g0732 243 PANTHER E3 UBIQUITIN-PROTEIN LIGASE AIRP2 3 242 - -
Tpr4g0732 243 SMART ring_2 148 185 IPR001841 -
Tpr4g0732 243 Pfam Zinc finger, C3HC4 type (RING finger) 145 191 - -
Tpr4g0732 243 ProSiteProfiles Zinc finger RING-type profile. 148 186 IPR001841 -
Tpr4g0732 243 SUPERFAMILY RING/U-box 136 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0732 Tpr-Chr4 6833518 6837022 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0732 140 189 C3H Transcription Factor Family AT5G41350 39.623 1.36e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0732 K25840 - zju:107430836 366.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0732 4 6833518 6837022 Tpr4g0732 4 6833518 6837022 ECH