Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0718 ATGAAGGAAACGGCCACCGCTGTCATTCGAGAAAGTTTATGTTTCAATCTGGTTTACAAGAACTGTGACTACCAAATGGAGCGTTACATTTTCAAACGCCGTCAAGACGGTATTTATATTATTAATCTTGGAAAGACTTGGGAGAAACTTCAACTAGCTGCTAGGGTCATTGTTGCAATTGAGAACGCTAAGGATATTATTGTCCAATCTGCAAGGCCTTATGGACAGAGAGCTGTTCTCAAGTTTGCTCAGTACACTGGAGCTAATGCCATTACTGGAAGGCATACTCCCGGAACTTTCACCAATCAGCTTCAGACTTCATTCAGCGAGCCTCGTCTTCTCATCCTCACCGATCCAAGAACTGATCATCAGGTGATAAATCTTCAACTGATTGGGACAAGGCATGGTCAAACTTTAAGAAGGAAGGGAAAAAAACTCCCTTCTCAAATTTTTCTCCAAATAAGTATGTAA 471 0.414 MKETATAVIRESLCFNLVYKNCDYQMERYIFKRRQDGIYIINLGKTWEKLQLAARVIVAIENAKDIIVQSARPYGQRAVLKFAQYTGANAITGRHTPGTFTNQLQTSFSEPRLLILTDPRTDHQVINLQLIGTRHGQTLRRKGKKLPSQIFLQISM* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0718 156 Gene3D - 15 129 - -
Tpr4g0718 156 SUPERFAMILY Ribosomal protein S2 20 126 IPR023591 -
Tpr4g0718 156 PANTHER 40S RIBOSOMAL PROTEIN SA 18 126 IPR005707 GO:0003735|GO:0006412|GO:0015935
Tpr4g0718 156 CDD RPS2 19 127 IPR001865 GO:0003735|GO:0005840|GO:0006412
Tpr4g0718 156 PRINTS Ribosomal protein S2 signature 37 46 IPR001865 GO:0003735|GO:0005840|GO:0006412
Tpr4g0718 156 PRINTS Ribosomal protein S2 signature 86 103 IPR001865 GO:0003735|GO:0005840|GO:0006412
Tpr4g0718 156 PRINTS Ribosomal protein S2 signature 111 128 IPR001865 GO:0003735|GO:0005840|GO:0006412
Tpr4g0718 156 PANTHER 40S RIBOSOMAL PROTEIN SA 18 126 - -
Tpr4g0718 156 Pfam Ribosomal protein S2 21 109 IPR001865 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0718 Tpr-Chr4 6725789 6735211 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0718 12 132 Cytoplasmic Ribosomal Protein Gene Family AT3G04770 82.645 3.20e-71 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0718 K02998 - ini:109192532 206.838