Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0717 ATGTATGAGATGTACCAGATTGTAAGGTTGAAATCTATAGGTTACTCCATAGGTGGTGGTGCCAACACTCTCAGTAAAGGTTACTCCATAGGTGATGGACTTGGAGCAGAGATTGTTGGTACATTTGTTCTTGTTTACACTGTCTTCTCTGCTACTGATGCCAAGAGAAATGCAAGAGACTCACATGTTCCTATTTTGGCACCATTGCCAATTGGATTTGCTGTGTTTTTGGTGCATTTGGCTACAATTCCAATTACAGGGACTGGTATTAACCCAGCAAGAAGTCTAGGTGCTGCCCTTATATACAACAAAGATCAAGCTTGGGACGATCACTGGATTTTTTGGGTTGGGCCTTTCATTGGGGCAGCACTTGCAGCTCTGTACCATCAGATAGTGATCAGGGCTATCCCCTTCAAATCAAAGTGA 426 0.4319 MYEMYQIVRLKSIGYSIGGGANTLSKGYSIGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKSK* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0717 141 SUPERFAMILY Aquaporin-like 10 133 IPR023271 -
Tpr4g0717 141 PRINTS Major intrinsic protein family signature 36 54 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0717 141 PRINTS Major intrinsic protein family signature 72 94 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0717 141 PRINTS Major intrinsic protein family signature 112 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0717 141 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 15 141 IPR034294 -
Tpr4g0717 141 Pfam Major intrinsic protein 17 129 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0717 141 Gene3D Glycerol uptake facilitator protein. 4 140 IPR023271 -
Tpr4g0717 141 PANTHER AQUAPORIN PIP1-2-RELATED 15 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0717 Tpr-Chr4 6722543 6724180 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0717 16 141 Major Intrinsic Protein MIP AT1G01620 88.889 1.22e-80 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0717 K09872 - gmx:100809467 248.44