Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0714 ATGGAGAACAAAGATGAAGATGTAACAATAGGAGCAAACAAGTATAGAGAAAACCAACCAATAGGAACTGCTGCACAAGCACAAGACAATGAAGCAAAAGACTACAAAGAAGCACCTTCAGCACCATTATTTGAGCATGGAGAGTTGTCATCATGGTCTTTTTATAGGGCAGGGATAGCTGAATTTGTGGCTACATTTTTGTTTCTTTATATAACGGTTTTAACTGTTATAGGTGTGAATAAATCTAATAATAAGTGCTCCTCTGTTGGTGTTCAAGGGATTGCTTGGGCTTTTGGTGGAATGATTTTTGCTCTTGTTTATTGTACTGCTGGTATCTCAGGTGGTCACATTAACCCAGCAGTGACATTTGGACTTTTCTTGGCACGCAAGCTATCTCTAACTAGGACATTATTCTACATAATTATGCAATGTTTGGGAGCTATTTGTGGTGCTGCTGTTGTTAAGGGTTTCCAACCACACCAATATGAGAGACTTGGAGGTGGTGCCAACACTCTAAGTAAAGGTTACTCCATAGGTGATGGACTTGGAGCAGAGATTGTTGGTACATTTGTTCTTGTTTACACTGTCTTCTCTGCTACTGATGCCAAGAGAAATGCAAGAGACTCTCATGTTCCTATTTTGGCACCATTGCCAATTGGATTTGCAGTGTTTTTGGTACATTTGGCTACAATTCCAATTACAGGGACTGGTATTAACCCAGCAAGAAGTCTAGGTGCTGCCCTTATATACAATAAGGATCAAGCTTGGGACGATCATTGGATTTTTTGGGTTGGGCCTTTCGTTGGGGCAGCACTTGCAGCTCTGTACCATCAAATAGTGATCAGGGCCATCCCCTTCAAATCAAAGTGA 870 0.4103 MENKDEDVTIGANKYRENQPIGTAAQAQDNEAKDYKEAPSAPLFEHGELSSWSFYRAGIAEFVATFLFLYITVLTVIGVNKSNNKCSSVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRTLFYIIMQCLGAICGAAVVKGFQPHQYERLGGGANTLSKGYSIGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWVGPFVGAALAALYHQIVIRAIPFKSK* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0714 289 TIGRFAM MIP: MIP family channel proteins 60 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0714 289 Pfam Major intrinsic protein 48 277 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0714 289 ProSitePatterns MIP family signature. 116 124 IPR022357 -
Tpr4g0714 289 PRINTS Major intrinsic protein family signature 56 75 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0714 289 PRINTS Major intrinsic protein family signature 98 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0714 289 PRINTS Major intrinsic protein family signature 135 154 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0714 289 PRINTS Major intrinsic protein family signature 184 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0714 289 PRINTS Major intrinsic protein family signature 220 242 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0714 289 PRINTS Major intrinsic protein family signature 260 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0714 289 SUPERFAMILY Aquaporin-like 48 282 IPR023271 -
Tpr4g0714 289 CDD MIP 56 280 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tpr4g0714 289 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 289 IPR034294 -
Tpr4g0714 289 Gene3D Glycerol uptake facilitator protein. 41 288 IPR023271 -
Tpr4g0714 289 PANTHER AQUAPORIN PIP1-4-RELATED 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0714 Tpr-Chr4 6700376 6703784 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0714 1 289 Major Intrinsic Protein MIP AT4G23400 84.083 3.03e-176 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0714 K09872 - cit:102618921 524.628