Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0711 ATGCCTTCATCTTCCACAACCATAGTTTCAAAATGCACAATCTATCCAAACCAAAAATCATCAATAAAACCCTTAAAACTCTCTGTTTCTGATCTTCCAATGCTTTCATGTCACTATATTCAAAAAGGAATTTTACTTTCTACACCCCCTTATTCCTTTGAAGACCTTATTCAAACCCTCAAAACCTCTCTTTCCATCACTCTCTCTCACTTCCCTCCTCTCGCCGGCCGACTCACCACCGACTCCGACGGTTACATTTACATAACTTCCAACGATGCCGGCGTCGATTTCATTCACTCCAAAGCCAAACACTTAACCATAAACACCGTCGTTTCACCTTCTTTGATCGATGTTCATCCTTGTTTCAAAGAATTCTTCGCTTATGACATGCCGGTTTCTTACTCCGGTCACCAAAACCCTCTCGCCGCTGTTCAAGTCACTGAACTCGCCGACGGTGTTTTCATCGGTTGTACTGTTAATCATTCCGTAACCGACGGTACTTCTTTCTGGCATTTCTTTAACACGTTCGCCGCCGTCACTAAAGGTGGCGGTGGCGGCGCTGTCAAGATCTCGAAATCTCCGGATTTCATAAGAAACACAATCTTTAACTCCACCGCTGTCCTCCCTATCCCCGCCGGTGGTCCCACCGTCACTTTCGACGTCGATGAGCCTCTCCGTGAACGTGTCTTTCATTTCTCTCGTGAATCCATTCTCAAACTTAAACAGAAAGCAAACAGTAACAGCAACGGTAACGGTTTAACAGATCCAACTGAGGTAATAGCAAAACAAGCAAATGACAGTTGGAAAAACGTTAACTCTAACGGCCACGTTAACGGAAGCGTTAAATCTAACGTGAGAAACGAGATCTCGTCGTTTCAATCGTTAAGTGCACAGTTATGGCGATCAGTGACACGTGCACGAAAATTAGATTCAACCAAAACGTCGACGTTTCGTATGGCCGTAAATTGTCGTCATAGATTAAACCCAAAAATGGAACCGTTTTATTTCGGTAACGCGATACAAAGTATCCCAACCGTTGCTTCAGTTAAAGATATTTTATCCAACGATCTAAAATACTGCGCTGGATTACTACATCAAAACGTCGTCGCACATGATGACGCTACGGTGCGCCGCGGAGTAGAGGATTGGGAAAATAATCCTAGGTTATTTCCACTAGGGAATTTTGATGGTGCTATGATAACAATGGGTAGTTCACCTCGTTTTCCTATGTATGATAATGATTTTGGTTGGGGTATACCTTTGGCTATAAGAAGTGGAAAAGCTAATAAATTTGATGGGAAAATTTCAGCTTTTCCTGGTAGAGAAGGAAATGGAAGTGTTGATCTTGAAGTTGTTTTGAAACCTGAAACTATGTTTGGGCTTGAAAATGACATTGATTTTATGCAGTATGTTACGGATGTAGTGTGA 1428 0.4251 MPSSSTTIVSKCTIYPNQKSSIKPLKLSVSDLPMLSCHYIQKGILLSTPPYSFEDLIQTLKTSLSITLSHFPPLAGRLTTDSDGYIYITSNDAGVDFIHSKAKHLTINTVVSPSLIDVHPCFKEFFAYDMPVSYSGHQNPLAAVQVTELADGVFIGCTVNHSVTDGTSFWHFFNTFAAVTKGGGGGAVKISKSPDFIRNTIFNSTAVLPIPAGGPTVTFDVDEPLRERVFHFSRESILKLKQKANSNSNGNGLTDPTEVIAKQANDSWKNVNSNGHVNGSVKSNVRNEISSFQSLSAQLWRSVTRARKLDSTKTSTFRMAVNCRHRLNPKMEPFYFGNAIQSIPTVASVKDILSNDLKYCAGLLHQNVVAHDDATVRRGVEDWENNPRLFPLGNFDGAMITMGSSPRFPMYDNDFGWGIPLAIRSGKANKFDGKISAFPGREGNGSVDLEVVLKPETMFGLENDIDFMQYVTDVV* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0711 475 Pfam Transferase family 6 467 - -
Tpr4g0711 475 Gene3D - 6 209 IPR023213 -
Tpr4g0711 475 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 5 472 - -
Tpr4g0711 475 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 5 472 - -
Tpr4g0711 475 Gene3D - 223 466 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0711 Tpr-Chr4 6652194 6655866 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0711 58 458 Monolignol Biosynthesis Gene Families AT5G48930 27.981 1.18e-35 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0711 - - gmx:100780358 744.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0711 4 6652194 6655866 Tpr4g0711 4 6652194 6655866 ECH