Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0704 ATGGCCGATGGACCGCAATATCCATCAGTTGCTCAGAAGTTACGTGGGCATTCTTATTTGGTGTCTAGACTTAGCCCCAACTTGAACTCCAGGAGTTACTCTACATCTGGTACTTATGCCTATGGAGGATTGCAGAATTCTGGTTTGGCGATTGGGTCACCTCTATCGTTCATTATGGTGCCTGCTCCATCAGAGAAAGAAGCAGCTGGGTTTTTGGTAGATTTTCTGATGGGAGGAGTGTCTGCTGCTGTGTCGAAGACAGCTGCTGCTCCTATTGAACAAGTTAAATTACTTATCCAAAACCAGTATGAAATGCTCAAAAGTGGCAGGTTATCTGAGCCATATAAGGGAATTGGTGATTGTTTTGCTCGAACCATGAAGGATGAGGGTGTAATTGCTCTGTGGAGAGGCAGTACTGCTAATGTTATCAGATATTTCCCTACTCAGGTCCCCTTCTTGTTTGCAATCATGGCCGATGGACCGCAATATCCATCAGTTGCTCAGAAGTTACGTGGGCATTCTTATTTGGTGTCTAGACTTAGCCCCAACTTGAACTCCAGGAGTTACTCTACATCTGGTACTTATGCCTATGGAGGATTGCAGAATTCTGGTTTGGCGATTGGGTCACCTCTATCGTCGATTATGGTGCCTGCTCCATTAGAGAAAGGTGCAGCTGGGTTTTTGGTAAATTTTCTGATGGGAGGAATGTCTGCTGCTGTGTCGAAGACAGCTGCTGCTCCTATTGAACGAGTTAAATTACTTATCCAAAACCAGTATAAAATGCTCAAAAGTGGCAGGTTATCTGAGCCATATAAGGGAATTGGTGATTGTTTTGGAATGTATGATTCTCTGAAACCAGTTGATTTGGTTGGTGGTATGCAGGCTCTGAACTTTGCGTTTAAAGATTACTTCAAGAGGCTTTTCAACTTCAAAAAAGACAGAGATGGCTATTGGAAGTGGTTTAATTTAGCATCTGGTGGGGATGATGGGGCTTCCTCACCCTTATTTGTCTATTCTTTGGATTATGCCCGTACCCGCTTGGCAAATTATGCAAAGGCTGCAAAGAAGGGTGGTGAGAAGCAGTTTAATGGAATGGTTGATGTTTACAGCAAAACCTTACAGTCTGATGGCATTGCTGGCCTTTATCGTGGTCTTTTCTTTGGAATGTATGATTCTCTGAAACCAGTTGATTTGGTTGGTGGTATGCAGAATATCGTACAATAG 1224 0.4338 MADGPQYPSVAQKLRGHSYLVSRLSPNLNSRSYSTSGTYAYGGLQNSGLAIGSPLSFIMVPAPSEKEAAGFLVDFLMGGVSAAVSKTAAAPIEQVKLLIQNQYEMLKSGRLSEPYKGIGDCFARTMKDEGVIALWRGSTANVIRYFPTQVPFLFAIMADGPQYPSVAQKLRGHSYLVSRLSPNLNSRSYSTSGTYAYGGLQNSGLAIGSPLSSIMVPAPLEKGAAGFLVNFLMGGMSAAVSKTAAAPIERVKLLIQNQYKMLKSGRLSEPYKGIGDCFGMYDSLKPVDLVGGMQALNFAFKDYFKRLFNFKKDRDGYWKWFNLASGGDDGASSPLFVYSLDYARTRLANYAKAAKKGGEKQFNGMVDVYSKTLQSDGIAGLYRGLFFGMYDSLKPVDLVGGMQNIVQ* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0704 407 Pfam Mitochondrial carrier protein 226 310 IPR018108 -
Tpr4g0704 407 Pfam Mitochondrial carrier protein 321 387 IPR018108 -
Tpr4g0704 407 Pfam Mitochondrial carrier protein 70 150 IPR018108 -
Tpr4g0704 407 Gene3D Mitochondrial carrier domain 222 393 IPR023395 -
Tpr4g0704 407 Gene3D Mitochondrial carrier domain 65 161 IPR023395 -
Tpr4g0704 407 PRINTS Adenine nucleotide translocator signature 71 83 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr4g0704 407 PRINTS Adenine nucleotide translocator signature 115 136 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr4g0704 407 PRINTS Mitochondrial carrier protein signature 230 243 IPR002067 GO:0055085
Tpr4g0704 407 PRINTS Mitochondrial carrier protein signature 243 257 IPR002067 GO:0055085
Tpr4g0704 407 PRINTS Mitochondrial carrier protein signature 282 302 IPR002067 GO:0055085
Tpr4g0704 407 PRINTS Mitochondrial carrier protein signature 332 350 IPR002067 GO:0055085
Tpr4g0704 407 ProSiteProfiles Solute carrier (Solcar) repeat profile. 69 163 IPR018108 -
Tpr4g0704 407 SUPERFAMILY Mitochondrial carrier 68 154 IPR023395 -
Tpr4g0704 407 ProSiteProfiles Solute carrier (Solcar) repeat profile. 225 307 IPR018108 -
Tpr4g0704 407 SUPERFAMILY Mitochondrial carrier 226 391 IPR023395 -
Tpr4g0704 407 ProSiteProfiles Solute carrier (Solcar) repeat profile. 317 407 IPR018108 -
Tpr4g0704 407 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 157 404 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr4g0704 407 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 149 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Tpr4g0704 407 PANTHER ADP,ATP CARRIER PROTEIN 3, MITOCHONDRIAL 1 149 - -
Tpr4g0704 407 PANTHER ADP,ATP CARRIER PROTEIN 3, MITOCHONDRIAL 157 404 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0704 Tpr-Chr4 6505458 6514912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0704 159 404 Antiporters AT4G28390 60.424 1.50e-97 294
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0704 K05863 - gmx:100818408 358.992