Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0669 ATGAAGTTATTTCTTCTTTGCTTTCATTTTTTCTTCAGTTTCACATTTTCTCTCTCATCCGATGGTCTAGCACTTCTCTCTCTGAAATCTGCTGTTGATCAATCCGGTGATGGTGTTTTCTCCGATTGGAACGGTGGAGATTCCTATCCCTGCGGTTGGTCGGGAATCTCCTGTGCTAATATCTCTGGTGTACCGGAGCCACGTGTTGTTGGAATCGCGCTTGCCGGAAAATCTCTCCGTGGTTATATTCCGTCGGAGCTTGGTACGCTTCGGTATCTTCGTCGTCTTAATCTTCATGATAATGATTTCTATGGTGTAGTTCCGGTTCAGCTGTTTAATGCTACTGCATTACATAGTATTTTTCTTCACCGGAATAATCTCTCCGGTCCGTTTCCGGCTTCCGTTTGTACTATTCCACGTCTTCAGAATCTTGACCTCTCTGACAATTCGTTATCCGGTAGCATTCCTAATGATGTCAAGAAATGTAAGCAGATTCAAAGGCTTATTTTAGCAAGGAACAAATTCTCTGGCGAGATTCCGGCCGGTGTATGGTCGGAACTCGATAATATCATCCAACTTGACCTCTCCGCCAATGATTTCAAAGGTTCAATCCCGGAAGATATTGGTGAACTTCATACCCTCTCTGGTACACTGAACCTCTCGTTCAACCACCTCTCCGGTAGGATTCCTAACTCACTCGGGAAATTGTCGGCCACCGTGAACTTTGATCTCCGAAACAACGACCTAATTGGCGAGATTCCCCAAACAGGAACATTTTCAAACCAGGGTCCAACTGCATTCCTCGGTAACAAAAACCTATGTGGACTTCCACTTAGAAAATCCTGCACAGGCTCAGACCGAGGATCAGGTTCCAATTCATCTTCTCGCGAAGACGAGCCTCGTAACAGCTCGAAAGGGTTGAGCCCTGGTTTGATTATTTTGATCTCAGCAGCCGATGTTGCTGGGGTCGCTCTTGTTGGACTTGTGATTGTGTATGTTTATTGGAAGAAAAAGGATGATGACAATGTGTGTAGTTGCATTGGGAAGAGAAGGTTTGATAATGAGGATGAGAATGGGAAAGAGAATGCTTGTACTTTGCTTCCATGTATGAATAATTTGAAGAATGAGGAAGACGGTGATGAGGGTGAAGTTGAGGTAGATGGAGGAGGGAAAGGGGAAGGTGAATTGGTGACAATTGATAAAGGTTTTAGGATTGAGCTTGATGAGCTTCTGAAGGCATCAGCATATGTGTTAGGGAAGAGTGCATTGGGGATTGTGTATAAGGTGGTGCTTGGAAATGGGATGCCTGTGGCTGTGAGGAGATTAGGGGAGGGTGGAGAAGAGAGGTATAAGGAGTTTGTGGCTGAGGTGCAAGTCATTGGGAAGGTGAAGCATCCTAATATTGTTAGGTTGAGAGCTTATTATTGGGCTCATGATGAAAAGCTTCTCATTAGTGATTTCATCTCCAATGGAAATTTGGGCAATGCACTTCGAGGGAGAAATGGTCAACCATCTTCTAACCTTTCATGGTCAACAAGGTTAAGAATTGCTAAAGGAATAGCAAGAGGCTTATCCTATCTTCATGAATTTAGTCCAAGGAAATTTGTCCATGGTGACATAAAACCGACAAACATCCTACTTGATAATGACTTACAACCCTACATTTCTGATTTCGGTCTTAACCGACTAATCAGCATCACAGGCAACAACCCTTCAACTGGTGGATTCATGGGTGGCGCTTTACCTTATTACGTGATGAAATCGTCACACAAAGAAAACAAAACAAATAATAGGTTGTCATTAGATAATGGTCGTGGTGGTAACAATTACAAAGCCCCCGAGGCTCGTGTACCTGGTTGTAGACCAACACAAAAATGGGATGTATATTCATTAGGTGTTGTTTTGCTTGAGTTGTTAACAGGGAAATCTACAGAATCTTCTCCCACATCGGCGTCATCATCGGCTTCTGTTGAAGTTTCTGATTTGGTAAGGTGGGTTAGAAATGGTTTTGATCAAGAAAGTCCATTATCTGAAATGGTTGATCCTTCATTGTTACAAGAAGTTCGTGCTAAGAAAGAGGTGTTGGCTGTGTTTCATGTTGCACTTGCTTGTACTGAAGGTGATCCCGAGGTTAGGCCTAGAATGAAAACTGTCTTCGAAAATCTTGAAAAAATCGGTAGGTAG 2184 0.4318 MKLFLLCFHFFFSFTFSLSSDGLALLSLKSAVDQSGDGVFSDWNGGDSYPCGWSGISCANISGVPEPRVVGIALAGKSLRGYIPSELGTLRYLRRLNLHDNDFYGVVPVQLFNATALHSIFLHRNNLSGPFPASVCTIPRLQNLDLSDNSLSGSIPNDVKKCKQIQRLILARNKFSGEIPAGVWSELDNIIQLDLSANDFKGSIPEDIGELHTLSGTLNLSFNHLSGRIPNSLGKLSATVNFDLRNNDLIGEIPQTGTFSNQGPTAFLGNKNLCGLPLRKSCTGSDRGSGSNSSSREDEPRNSSKGLSPGLIILISAADVAGVALVGLVIVYVYWKKKDDDNVCSCIGKRRFDNEDENGKENACTLLPCMNNLKNEEDGDEGEVEVDGGGKGEGELVTIDKGFRIELDELLKASAYVLGKSALGIVYKVVLGNGMPVAVRRLGEGGEERYKEFVAEVQVIGKVKHPNIVRLRAYYWAHDEKLLISDFISNGNLGNALRGRNGQPSSNLSWSTRLRIAKGIARGLSYLHEFSPRKFVHGDIKPTNILLDNDLQPYISDFGLNRLISITGNNPSTGGFMGGALPYYVMKSSHKENKTNNRLSLDNGRGGNNYKAPEARVPGCRPTQKWDVYSLGVVLLELLTGKSTESSPTSASSSASVEVSDLVRWVRNGFDQESPLSEMVDPSLLQEVRAKKEVLAVFHVALACTEGDPEVRPRMKTVFENLEKIGR* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0669 727 SMART serkin_6 412 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0669 727 MobiDBLite consensus disorder prediction 592 616 - -
Tpr4g0669 727 Pfam Protein kinase domain 417 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0669 727 MobiDBLite consensus disorder prediction 283 305 - -
Tpr4g0669 727 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 726 - -
Tpr4g0669 727 Gene3D Phosphorylase Kinase; domain 1 401 487 - -
Tpr4g0669 727 PANTHER RECEPTOR PROTEIN KINASE-LIKE PROTEIN ZAR1 3 726 - -
Tpr4g0669 727 ProSiteProfiles Protein kinase domain profile. 412 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0669 727 Pfam Leucine rich repeat N-terminal domain 19 58 IPR013210 -
Tpr4g0669 727 Gene3D Transferase(Phosphotransferase) domain 1 488 726 - -
Tpr4g0669 727 SUPERFAMILY Protein kinase-like (PK-like) 417 723 IPR011009 -
Tpr4g0669 727 SUPERFAMILY L domain-like 20 279 - -
Tpr4g0669 727 ProSitePatterns Serine/Threonine protein kinases active-site signature. 535 547 IPR008271 GO:0004672|GO:0006468
Tpr4g0669 727 Gene3D Ribonuclease Inhibitor 185 284 IPR032675 -
Tpr4g0669 727 Gene3D Ribonuclease Inhibitor 18 184 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0669 Tpr-Chr4 6172405 6176605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0669 13 725 Receptor kinase-like Gene Family AT1G67510 65.517 0.0 926
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr4g0669 Pkinase 1.1e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0669 - - gmx:100787556 988.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2221 6 24107946 24113311 Tpr4g0669 4 6172405 6176605 PCT