Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0667 ATGTCAAACGGTGCTCCCCAACCAAAGTATGATGTTTTTGTAAACTTTAGGGGCAATGACATCCGCGACGGCTTTCTTGGCCATATGGCTAAGGCTTTTTCTCGAAAGCAAATAAATGCCTTTGTTGACGACAAACTTAAGAGGGGCGACGACATATCACATTCACTTGTTCAGGCAATTGAAGGGTCATTCATTTCATTGATCATATTCTCAGAAAACTATGCTTCTTCACATTGGTGTTTAGAAGAACTTGTGAAAATAATTGAGTGCAAAGAGAAATATGGACAGATAGTAATACCTGTTTTCTACAGGGTAGATCCTACAGATGTACGGCATCAAAAGAAGAGTTATGAAAATGCATTTGCTGAACTTGAAAAAAAGTATACTTCATTGGAGGTGCAAATATGGAGACAAACTTTGAACAAATCTGCTAATTTGTCAGGAATTAAGTCCATAGATTTTCGGAATGATGCTGAGCTACTCGAAGAAATCATTAATCTTGTGTTGAAAAGGTTGAGTAAGCACCCTATTAACACAAAAGGTCTTGTTGGAATTGGCAAACCAATTGCACATTTAGAATCATTGTTATGTCAAGAGTCAGAAAAGGTTCGTGTCATTGGAATTTGGGGTATGGGAGGTATTGGCAAGACAACAATTGCAGAAGAAATTTTTAACCAAAAGTGCTCTGAATATGAAGGTTGTTGTTTTTTGGCAAAGGTAAGTGAAGAATTAGGAAGACAAGGTGGAATGACACTTTTGAAAGAGAAACTTTTTTCTACATTACTTGCAGAAGATGTGAAAATCAATTCACCAAATGGGCTGTCTGATTATATTGAGAGAAGGATTGGTCGTATGAAGGTTCTTATTGTTCTTGATGATGTTAAGGAAGAAGATCAGCTAAAGATGTTATTTGGAACTCTTGATTTGCTTCAATCCGGTAGTAGAATAATTGTAACAACTAGAGATAAGCAAGTACTTATTACTAATGAAGTTGATGATAATGATATATATGAAGTTGGGGTATTGGATTCTAGTGATGCACTTGAGCTTTTCAATTTGAATGCATTTAAACAAAGTCATCTTGAAATGGAGTTCTATGAGCTATCAAAGATGGTGGTGAATTATGCCAAAGGAATTCCGTTAGTTCTTAAAGTTTTGGCTCATCTACTTCGTGGAAAAGATAAGGCAATATGGGAAAGTCAGCTAGACAAACTTAAAAGAATGCCAACTAGAAAAGTTCATGATGTAATGAGGCTCAGTTATGATGATCTTGATCGTTTAGAGCAAAAGTACTTTTTAGATATTGCATGTTTCTTCAATGGGTTGAGTTTGAAAGTGGATTACATGAAACTTTTATTGAAAGATTGTAAAAGTGATAATTCAGTGGCTGTTGGGTTAGAAAGGTTGAAAGATAAAGCTCTTATAAAAATTTCTGAAGATAATGTTATATCTATGCATGACATACTGCAAGAAATGGGCCGAGAGGTTGTTCGCCAAGAATCTAGTAAAGACCCTAGAAAACACAGTCGGTTATGGGATTATGATGACATTTGTGATGTATTGGAAAATGAGAAGGGTACTGATGCTACTATTAGAAGCATACGTGGAGACTTGTCTGGAAATAGAAAGCTGTATTTAGGCCCTCATGCAATTGCTAAGATGACCAACCTGCAATTTTTGGATTTTCGTGGTAAAAATAAACCCTTTGACATCTTATTATATTTGAAAGAGAAACACGACCAAAATTGTATGATTCTTCTTCCTCAAGGACTTCAATCTTTTCCACCTGATATAAGATATCTTCATTGGAAACATTACCCTCTAAAATCATTCCCAGAGACGTTTTCTGCTGAGAATCTTGTTATGTTGGACTTGTCATATAGTCTAGTGGAAAAGCTTTGGTGTGGAGTGCAGGATCTAGTTAATCTAAAAGAAGTTCGACTCTCTAATTCAATATTACTGAAGGAGTTACCAGACTTTTCAAAAGCCACAAGTCTTAATGTATTGCTTGTGTACAGTTGTCCTCGGTTGGAAAGCATCCATCCATCTATTTTCTCTCTTCAAAAGCTTGTGCAATTGGACCTAAGTTTTTGCCGTTCCCTTGCAACATTTACAAGCAACTCCCATTTAAGCTCCATCAATTATCTCAACCTTGGATTTTGCAGAAATCTTTGTAAATTCTCAGTGACTTTGGAGAATATTATTGAATTAGATCTAACGGCCATTCCCATCAATGCACTGCCAGCATCATTTGGATTTCATAGCAAGCTAGAAACCCTGGTTTTAAAACTTAGTCAAATTGAGAGCATACCTTCAAGCATCAAGAATCTTACAAAACTAAGAAAACTAGACATAATAGATTGCAATAAGCTTCTTGCTCTACCCGAGCTTCCTTCATCAGTTGAAACTGTACTCGTTGAATGTCGATTGATTAAAACTGTATTGTTCCCTTCAAAAGCTGTTGAACAATTCAAGGAAAACAAGAAAAGGATTGAGTTCTGGAATTGCTTGAACTTGGATGAACGTTCTCTCATAAATATTGGGTTGAATCTGCAAATCAATTTGATGAAGTTTACGTATCAACATTTATCGACACTGGAACATGATTATGTTGAAAGTTATGTTGATTACAAAGATAACTTTGTTTCTTATCAAGCTGTTTATGTGTATCCTGGAAGTAGTGTTCCAGAGTGGTTGGAGTATAAGACAACAAACGATGACATGAATGTTGATCTCTCTCCACCGCATCTCTCCCCTTTGTTGGGCTTTGTTTTTTGCTTTATCCTTGCTGGGGTGGTTACATCTGATAACCCAATTGACTTTAAAATCACTACAATTGATGCTGAGGGTTATGGTGAAAAGTTTGATGCATCAGTTACTGCACTTTCAATTTCCGAGGCAGGTAAAGAAGCATAG 2916 0.3615 MSNGAPQPKYDVFVNFRGNDIRDGFLGHMAKAFSRKQINAFVDDKLKRGDDISHSLVQAIEGSFISLIIFSENYASSHWCLEELVKIIECKEKYGQIVIPVFYRVDPTDVRHQKKSYENAFAELEKKYTSLEVQIWRQTLNKSANLSGIKSIDFRNDAELLEEIINLVLKRLSKHPINTKGLVGIGKPIAHLESLLCQESEKVRVIGIWGMGGIGKTTIAEEIFNQKCSEYEGCCFLAKVSEELGRQGGMTLLKEKLFSTLLAEDVKINSPNGLSDYIERRIGRMKVLIVLDDVKEEDQLKMLFGTLDLLQSGSRIIVTTRDKQVLITNEVDDNDIYEVGVLDSSDALELFNLNAFKQSHLEMEFYELSKMVVNYAKGIPLVLKVLAHLLRGKDKAIWESQLDKLKRMPTRKVHDVMRLSYDDLDRLEQKYFLDIACFFNGLSLKVDYMKLLLKDCKSDNSVAVGLERLKDKALIKISEDNVISMHDILQEMGREVVRQESSKDPRKHSRLWDYDDICDVLENEKGTDATIRSIRGDLSGNRKLYLGPHAIAKMTNLQFLDFRGKNKPFDILLYLKEKHDQNCMILLPQGLQSFPPDIRYLHWKHYPLKSFPETFSAENLVMLDLSYSLVEKLWCGVQDLVNLKEVRLSNSILLKELPDFSKATSLNVLLVYSCPRLESIHPSIFSLQKLVQLDLSFCRSLATFTSNSHLSSINYLNLGFCRNLCKFSVTLENIIELDLTAIPINALPASFGFHSKLETLVLKLSQIESIPSSIKNLTKLRKLDIIDCNKLLALPELPSSVETVLVECRLIKTVLFPSKAVEQFKENKKRIEFWNCLNLDERSLINIGLNLQINLMKFTYQHLSTLEHDYVESYVDYKDNFVSYQAVYVYPGSSVPEWLEYKTTNDDMNVDLSPPHLSPLLGFVFCFILAGVVTSDNPIDFKITTIDAEGYGEKFDASVTALSISEAGKEA* 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0667 971 Gene3D Ribonuclease Inhibitor 535 725 IPR032675 -
Tpr4g0667 971 Coils Coil 114 134 - -
Tpr4g0667 971 Pfam TIR domain 9 176 IPR000157 GO:0007165
Tpr4g0667 971 ProSiteProfiles TIR domain profile. 8 172 IPR000157 GO:0007165
Tpr4g0667 971 SUPERFAMILY "Winged helix" DNA-binding domain 412 522 IPR036390 -
Tpr4g0667 971 Pfam NB-ARC domain 196 421 IPR002182 GO:0043531
Tpr4g0667 971 PRINTS Disease resistance protein signature 205 220 - -
Tpr4g0667 971 PRINTS Disease resistance protein signature 281 295 - -
Tpr4g0667 971 PRINTS Disease resistance protein signature 376 390 - -
Tpr4g0667 971 PRINTS Disease resistance protein signature 685 701 - -
Tpr4g0667 971 Gene3D Ribonuclease Inhibitor 726 818 IPR032675 -
Tpr4g0667 971 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 945 IPR044974 GO:0006952
Tpr4g0667 971 SMART till_3 9 146 IPR000157 GO:0007165
Tpr4g0667 971 SUPERFAMILY L domain-like 535 854 - -
Tpr4g0667 971 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 172 435 IPR027417 -
Tpr4g0667 971 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 148 IPR035897 -
Tpr4g0667 971 Gene3D - 341 425 IPR042197 -
Tpr4g0667 971 Gene3D - 7 174 IPR035897 -
Tpr4g0667 971 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 7 945 - -
Tpr4g0667 971 Gene3D - 175 332 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0667 Tpr-Chr4 6141486 6147273 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0667 4 796 WRKY Transcription Factor Family AT4G12020 32.922 1.39e-96 333
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0667 - - mtr:MTR_4g014120 1257.28