Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0661 ATGGAGAACAATACTTGGCATAATGCTAAAGATTTGATTTTTGGCTTAAACCCATTTCAGAAATGTAGAAAAAATCAAAAGGGTAGTTTTATTTTATTGAGTTTTTTACTTTTTGTATGTTTTAGTGTTGAACCTGTTTTAGGTCATTTATGGGATGGTGTTGTTGTAACACAATCTGATTTTCAATCTCTAAGGGCTATTAAAAATGAACTTATTGATTCAAAAGGGGTTTTGAAAAGCTGGAATGATAGTGGTTTAGGTGCTTGTTCAGGTAATTGGGTTGGAATCAAATGTTTGAAAGGTGAAGTTATTGCAATTCAACTTCCTTGGAAAAGTTTAGGTGGAAAAATTTCTGAGAAAATTGGTCAACTTCAATCTCTTAGGAAATTAAGTCTTCATGATAATGCACTTGTTGGTTCAATTCCTTTTTCTCTTGGTTTTCTTCCTAATCTTAGAGGTCTTTATCTTTTCAATAACAAGCTTTCAGGTTCTATTCCTCTTTCTATTGCTAATTGTCCAATGCTTCAATCTTTTGATGTTAGTCATAATTCACTTATTGGTAAAATTCCTTCTGGTTTAGCAAATTCAACTAGGATTTTCAGGATTAATTTGAGTTATAATTCACTTTCTGGTTCAATTCCTAGTTCATTCACTATGTCACATACTTTAACTATTCTTTCTCTTGAATTCAATAATTTAACTGGTCCTATTCCAAGTGAATTAGGTAAACTTACAAGGCTTAGAATTCTTGATCTTTCAAACAATGCTATCAATGGTAGTTTTCCTTTAAGCTTCTCTAATCTGTCTTCTCTTGTTTCATTGAATGTTGAAAACAATCATCTTGAAAACCATGTGCCTAATACTTTTGAAAATTTACATAACCTTTCTGTGATTAACTTGAAGAACAATAAGTTTGATGGTAAAATTCCATCAACACTTGGAAACATCTCAAACATTAGTCAAATTGATTTGTCTCAGAACAAATTTGTTGGTGAAATTCCTGATTCTTTTACTAAACTAGCAAATCTAAGTTCATTCAATGTCTCTCATAACAATCTATCTGGTCATGTTCCATCTCTACTTTCCAAAAAATTCAATGCTAGTTCATTTGAAGGGAACTTTGGTCTATGTGGTTACATAAGTTCAAAACCATGTCCTTCACCATCACCACCACCTCATAATCTTCCAGCTCAATCACCAGAAGAACCTCCCTCAAAGAAACATCACAGAAAATTGAGCACAAAGGACATAATCCTCATAGTAGCTGGTGTTCTTTTGTTGATTTTGTTATTACTTTGCTGCTTTTTGCTTTGTTGTTTGGTCAGGAAAAGAGCTTCTTCAAGCAGAAAGAGTAGCAAAGCTGCCAAAGCTGCTGCTTCTGCTAGGAGTGTGGAGAAAGGCGGTCCAGCTGGTGGTGAAGTTGTATCAGGAGGTGAAGCTGGTGGAAAACTAGTTCACTTTGATGGACCATTTGTGTTCACTGCTGATGATCTTTTGTGTGCTACTGCTGAGATAATGGGGAAAAGTGCTTATGGAACAGCTTACAAGGCAACATTGGAAGATGGTAATCAAGTTGCTGTGAAGAGGTTGAGGGAGAAGACTACTAAAGGACAGAAGGAGTTTGAAGCTGAGGTTGCTTCACTTGGCAAAATCAGACATCAAAATCTGTTAGCTCTTAGAGCTTACTATCTTGGACCTAAGGGAGAGAAGCTTCTTGTGTTTGATTACATGAGTAGAGGAAGCCTAGCATCATTCCTTCATGCTCGCGGACCTGAAATCATCGTCGAGTGGCCAACAAGGATGAAAATAGCAATTGGAATCACCAATGGGCTATGTTGCCTTCACAATCAAGAGAATATAGTACATGGCAATCTGACCTCAAGCAACATACAATTAGATGAGCAAACAAATCCTCACATCACAGATTTTGGTCTTTCAAGACTAATGACAACTTCTGCCAATACAAACATCATTGCTACAGCAGGAAGTCTTGGCTATAATGCACCAGAGCTTTCAAAGACGAAGAAACCGACCACAAAAACCGACGTTTACAGCCTCGGTGTTATCCTTTTGGAACTCTTAACTGGTAAACCACCTGGAGAACCAACCAATGGAATGGACTTGCCTCAATGGGTTGCATCGATAGTTAAAGAAGAGTGGACCAATGAAGTGTTTGATTTGGAACTCATGAGGGATGCACCAACCATAGGAGATGAACTTCTTAATACATTGAAATTAGCTTTACATTGTGTTGATCCTTCACCTTCTGCAAGGCCAGAAGTTAAGCAAGTTTTGCAGCAACTAGAGGAGATTAAGCCAGAATTGGTTGAAGCTGAAGTTGATGATGATGGAGCTAAGGTTCAAACAAATGAATAA 2376 0.3678 MENNTWHNAKDLIFGLNPFQKCRKNQKGSFILLSFLLFVCFSVEPVLGHLWDGVVVTQSDFQSLRAIKNELIDSKGVLKSWNDSGLGACSGNWVGIKCLKGEVIAIQLPWKSLGGKISEKIGQLQSLRKLSLHDNALVGSIPFSLGFLPNLRGLYLFNNKLSGSIPLSIANCPMLQSFDVSHNSLIGKIPSGLANSTRIFRINLSYNSLSGSIPSSFTMSHTLTILSLEFNNLTGPIPSELGKLTRLRILDLSNNAINGSFPLSFSNLSSLVSLNVENNHLENHVPNTFENLHNLSVINLKNNKFDGKIPSTLGNISNISQIDLSQNKFVGEIPDSFTKLANLSSFNVSHNNLSGHVPSLLSKKFNASSFEGNFGLCGYISSKPCPSPSPPPHNLPAQSPEEPPSKKHHRKLSTKDIILIVAGVLLLILLLLCCFLLCCLVRKRASSSRKSSKAAKAAASARSVEKGGPAGGEVVSGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNQVAVKRLREKTTKGQKEFEAEVASLGKIRHQNLLALRAYYLGPKGEKLLVFDYMSRGSLASFLHARGPEIIVEWPTRMKIAIGITNGLCCLHNQENIVHGNLTSSNIQLDEQTNPHITDFGLSRLMTTSANTNIIATAGSLGYNAPELSKTKKPTTKTDVYSLGVILLELLTGKPPGEPTNGMDLPQWVASIVKEEWTNEVFDLELMRDAPTIGDELLNTLKLALHCVDPSPSARPEVKQVLQQLEEIKPELVEAEVDDDGAKVQTNE* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0661 791 ProSiteProfiles Protein kinase domain profile. 500 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0661 791 Pfam Leucine rich repeat N-terminal domain 59 98 IPR013210 -
Tpr4g0661 791 MobiDBLite consensus disorder prediction 388 408 - -
Tpr4g0661 791 CDD STKc_IRAK 506 771 - -
Tpr4g0661 791 Gene3D Ribonuclease Inhibitor 198 265 IPR032675 -
Tpr4g0661 791 Gene3D Ribonuclease Inhibitor 56 197 IPR032675 -
Tpr4g0661 791 SMART LRR_typ_2 244 267 IPR003591 -
Tpr4g0661 791 SMART LRR_typ_2 340 363 IPR003591 -
Tpr4g0661 791 SMART LRR_typ_2 268 291 IPR003591 -
Tpr4g0661 791 SMART LRR_typ_2 148 172 IPR003591 -
Tpr4g0661 791 SMART LRR_typ_2 124 145 IPR003591 -
Tpr4g0661 791 SUPERFAMILY L domain-like 113 364 - -
Tpr4g0661 791 Gene3D Ribonuclease Inhibitor 266 386 IPR032675 -
Tpr4g0661 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 26 241 - -
Tpr4g0661 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 230 785 - -
Tpr4g0661 791 Gene3D Transferase(Phosphotransferase) domain 1 578 788 - -
Tpr4g0661 791 Pfam Leucine rich repeat 126 185 IPR001611 GO:0005515
Tpr4g0661 791 Pfam Leucine rich repeat 222 281 IPR001611 GO:0005515
Tpr4g0661 791 Pfam Protein tyrosine and serine/threonine kinase 504 768 IPR001245 GO:0004672|GO:0006468
Tpr4g0661 791 Gene3D Phosphorylase Kinase; domain 1 506 577 - -
Tpr4g0661 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 230 785 - -
Tpr4g0661 791 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 26 241 - -
Tpr4g0661 791 SUPERFAMILY Protein kinase-like (PK-like) 504 773 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0661 Tpr-Chr4 6098419 6102017 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0661 49 773 Receptor kinase-like Gene Family AT3G51740 63.871 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr4g0661 PK_Tyr_Ser-Thr 2.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0661 - - aip:107625805 1113.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0661 4 6098419 6102017 Tpr4g0661 4 6098419 6102017 ECH