Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0648 ATGGGAAGTTGTTGCAGCATCCAAGTTGAATGTAATCAAAAGATTATTGATGGTGGAACCCGGGTCATACTAAATGGATCCTCTAAATATGTCTCAATGTACATCCAAAAGGGTTCAAAAGGAATTAATCAAGATGCAATGACAGTTTGGGAGAACTTCAATGGAGATGAAGACACAATATTTTGTGGTGTGTTTGATGGTCATGGTCCTCGAGGACACAAATTTGCACAATCTATACGTGACAATCTACCCTCCACACTCTCTACAACAATCAAAATGTCACAACAAAATGTCTCCAATGAAAATGATGCTAATGCTACAAACAAAAGCACTTATAATGATTCATGGGAAGAACACTTTTCTAGCTCTTTCAATCAAATGGATGAACATCTTGCTAAGAACGTTGACACTGACGGACTTTGTGGCGGTTGCGTAGCGATAACTTTAATTAAACAGGGTGACCAATTGATAATTGGCAATTTAGGGGATTCTCGTGCAGTTCTTTGCACAAAAGAAGATAATAATCAACTTATTCCTATTCAACTTTCTGTTGACATGGTTCCAGATGTTCCAAGTGAAAGTAATAGAGTGATTAAGTGTGGAGGTAGAGTTTTTGCAGCAGAACAAGATCCTGATGTAAAAAGAATTTGGATGCCTGAAGGTGATTGCCCTGGATTAGCTATGTCAAGAGCCTTTGGAGATTTTTGCCTAAAAGATTATGGCCTCTCCTCAGTTCCTGATTTATCTTATAGAAAACTTACCGAGCAAGATGAATTTATCGTTTTGGCTTCTGATGGGATATGGAATGTGTTATCAAATGAAGATGTAATTAACGAAGTTGCATCAGCACCAAAGAGATCATTAGCAGCCAAATTGTTAGTGAAACGTGCAGTTAAAGCTTGGAAAAACAAGTATCCATTTTACTATGTTGATGATTGTTCAGCCATATGTTTGTTCTTGAATGATGACCAAGTTAATGTGTAA 984 0.372 MGSCCSIQVECNQKIIDGGTRVILNGSSKYVSMYIQKGSKGINQDAMTVWENFNGDEDTIFCGVFDGHGPRGHKFAQSIRDNLPSTLSTTIKMSQQNVSNENDANATNKSTYNDSWEEHFSSSFNQMDEHLAKNVDTDGLCGGCVAITLIKQGDQLIIGNLGDSRAVLCTKEDNNQLIPIQLSVDMVPDVPSESNRVIKCGGRVFAAEQDPDVKRIWMPEGDCPGLAMSRAFGDFCLKDYGLSSVPDLSYRKLTEQDEFIVLASDGIWNVLSNEDVINEVASAPKRSLAAKLLVKRAVKAWKNKYPFYYVDDCSAICLFLNDDQVNV* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0648 327 ProSiteProfiles PPM-type phosphatase domain profile. 30 320 IPR001932 -
Tpr4g0648 327 PANTHER ALPHABET, ISOFORM E-RELATED 12 324 - -
Tpr4g0648 327 SUPERFAMILY PP2C-like 25 322 IPR036457 -
Tpr4g0648 327 PANTHER PROTEIN PHOSPHATASE 2C 65-RELATED 12 324 - -
Tpr4g0648 327 Pfam Protein phosphatase 2C 46 298 IPR001932 -
Tpr4g0648 327 Gene3D - 24 323 IPR036457 -
Tpr4g0648 327 CDD PP2Cc 30 320 IPR001932 -
Tpr4g0648 327 SMART PP2C_4 25 318 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0648 Tpr-Chr4 6021254 6023673 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0648 19 321 PP2C-type Phosphatase Gene Family AT5G01700 52.459 6.49e-115 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0648 - - cam:101501265 479.944
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0648 4 6021254 6023673 Tpr4g0648 4 6021254 6023673 ECH
Tpr6g2203 6 23922333 23925334 Tpr4g0648 4 6021254 6023673 PCT