Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0638 ATGAGAAACCCATTTAGGACTTTTCACAAACACTTCACATTCATTTCCTTCCATAAAAATCCTCACTCTTATGGTTTCCTAACTTCTTCTTCTCCTACACACCCCACCATCTTTCAATTTCGCTCATCATATTCCTCATCTCCATCTTCTACATTTATGGAGGTATTCAAAGCAATTGCTAAGCAAGACCTTGCATCCCACGCAAATGTTGCTATCAGAGCTGATCAGAAGAGTTATAGTTACAAGCAACTTATCTCGTCGGCACTGAAGATATCTAATCTCTTGTGTGGAAGTGATGTCAAAGCAGGAAATCTTGGTGGAGCACGAATAGGAATTGTAGCGAAACCCTCTGCTGAATTTGTTGCAGGAATACTTGGGACTTGGCTTAGTGGAGGTGTTGCTGTTCCACTTGCAGTCAGCTATCCAGAAGTAGAGCTCCTCTATGTGATGAATAATTCGGACACATCTGCAATACTGAGTACTGAAGATCATAGTGAATTAATGCAAAACATCGCCAATAAAACCTCTTCTCAATTTTTTCATCTTCCGCCTGTTGCTAATAAGTCGTTAGAGAAGAGTAGAGATGAACATTCACATAATGGGGAAATTGATTCAAACAGAATTTTCCTGGAGAATATTCAAAGATCAAGTGAAGATCCGGCACTCATTTTGTACACTAGCGGAACAACAGGTAAACCTAAGGGAGTTGTTCATACACATGGAAGCATCATTGCTCAGGTCCAATCCTTGGCAAAAGCGTGGGAGTACACATCTGCCGATCAGTTTTTGCATTGTCTACCACTGCATCATGTCCATGGGCTTTTCAACGGTTTACTGGCTCCTCTCTACGCTGGATCCACGGTTGAGTTTTTGCCAAAATTTAGTGTCAGGGGAGTTTGGCAGAGATGGCGTGAGTCATATCCAACTGAAGGATCTAAGGCTGATGATGCTATAACTGTATTTACTGGAGTTCCAACTATATATGCCCGATTAATTCAAGGTTATCATGCGATGGATCCAGAGCTACAAGCTGTTTCAGCATCTGCTGCAAGGAACTTGCGTCTAATGATGTGTGGGTCCTCGGCACTTCCTCAGCCTGTTATGCAAGAATGGGAAGCAATCACTGGGCATCGTTTATTGGAACGATATGGCATGACTGAATTTGTCATGGCATTGTCAAATCCATTGAAAGGTGAGCGTAAGGCAGGCACAGTTGGAAAACCATTGCCTGGTGTGCAGGTCCAGATTCTTGCAGATGGGGAGAGTTGGAGTGAAGGAACTGGAGCCAGTGGTGAGCTTTGCGTTAAAAGCCCTTCACTGTTTAAAGAATATTGGAAACTTCCAGAGGTAACGAAGGAATCATTTACAGAAGAAGGGTTCTTTAAGACCGGAGATGCCGTTACAACAGATAAAGATGGATATTACATCATTCTAGGACGTACTAATGCAGATATCATCAAGGCCGGTGGCTATAAGCTGTCTGCATTGGAAATCGAATCAGTTATAATAGAGCATCCATCTGTCTCAGAATGTTGTGTCTTGGGATTACCACACAAAGAATATGGAGAAATTGTTGGTGCAATTATCGTGCCAGAGTCCGATGTTAAAAGAAAGCGAGATGAAGAGTCAAAGCCTGCTCTAAGCCTTGAAGAATTATCCACCTGGGCCAAAGATAAACTTGCACCTTACAAGATACCAACTCGACTTATCGTGTGGGACTCACTCCCCCGCAATGCAATGGGGAAGGTAAGTAAAAAAGAGCTGAAGAAGATGCTAGCTTCAGAATAG 1788 0.4267 MRNPFRTFHKHFTFISFHKNPHSYGFLTSSSPTHPTIFQFRSSYSSSPSSTFMEVFKAIAKQDLASHANVAIRADQKSYSYKQLISSALKISNLLCGSDVKAGNLGGARIGIVAKPSAEFVAGILGTWLSGGVAVPLAVSYPEVELLYVMNNSDTSAILSTEDHSELMQNIANKTSSQFFHLPPVANKSLEKSRDEHSHNGEIDSNRIFLENIQRSSEDPALILYTSGTTGKPKGVVHTHGSIIAQVQSLAKAWEYTSADQFLHCLPLHHVHGLFNGLLAPLYAGSTVEFLPKFSVRGVWQRWRESYPTEGSKADDAITVFTGVPTIYARLIQGYHAMDPELQAVSASAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMALSNPLKGERKAGTVGKPLPGVQVQILADGESWSEGTGASGELCVKSPSLFKEYWKLPEVTKESFTEEGFFKTGDAVTTDKDGYYIILGRTNADIIKAGGYKLSALEIESVIIEHPSVSECCVLGLPHKEYGEIVGAIIVPESDVKRKRDEESKPALSLEELSTWAKDKLAPYKIPTRLIVWDSLPRNAMGKVSKKELKKMLASE* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0638 595 CDD MCS 70 590 - -
Tpr4g0638 595 Pfam AMP-binding enzyme 69 486 IPR000873 -
Tpr4g0638 595 SUPERFAMILY Acetyl-CoA synthetase-like 23 594 - -
Tpr4g0638 595 Pfam AMP-binding enzyme C-terminal domain 497 582 IPR025110 -
Tpr4g0638 595 ProSitePatterns Putative AMP-binding domain signature. 223 234 IPR020845 -
Tpr4g0638 595 Gene3D - 483 595 IPR045851 -
Tpr4g0638 595 PANTHER ACYL-COA SYNTHETASE 38 594 - -
Tpr4g0638 595 PANTHER MALONATE--COA LIGASE-LIKE 38 594 - -
Tpr4g0638 595 Gene3D - 56 480 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0638 Tpr-Chr4 5922903 5931156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0638 218 594 Monolignol Biosynthesis Gene Families AT4G19010 28.827 5.73e-44 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0638 K18660 - gmx:100813324 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0638 4 5922903 5931156 Tpr4g0638 4 5922903 5931156 ECH