Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0623 ATGGCGGCACCATTGATACTACCCAAATTGACTCTTCTAATCCTTGTATTCTGCATTTTAATCTCTTTCGATCAACACAAACACAACACCAATAACAACAACAACAACAACAAAACCTTCAATTTCATCAACACCATTCCATTTCCAATACATTCTTTTTCCGGTGGTCCTGTTTCTTTATCTGTCACCACCAACAAGAACCATTATTCAGACTCTTCTTCTTCTGATTCTAATTCTCAATCTCTTCTTGAATATGATTTTTACCGTAATTCTTGTCCGAATGCTGAACGCATTGTTCGTTCTACACTTCATCGGGTTTATAAAACTAATCACACTTTGATTCCTGCTCTTATTCGTCTTGCTTTTCATGATTGCTTCATTCAGGGATGTGATGCTTCTATTTTGTTAGAAGATGATGATTACATTGATTCAGAGAAAGATTCACCTCCCAATGGAAGTCTCAAAGGCTTTGATGTAATAGAGACGATTAAATCCAAGCTTGAAGTGGCATGTCCTGGAGTTGTTTCTTGTGCTGATATTCTTGTGCTGGCTGCAAGAGACTCTGTTGCTCTGGCTGGTGGTCCATTCTATCCATTATATACAGGAAGGAGGGATGGTTCTAACTCTTTTGCTGACATTGCAACAGATGAGCTTCCTTCACCCTATGCTGATTTATCTCAAATCATTTCATCCTTCAAATTAAGGGGATTTGATGAAAGAGAAATGGTCACTCTCTTAGGTGCCCACAACATTGGTGTAATCCATTGCAAATTCTTCGAAAATCATCTTTATAACCTCAGTGGAACTAATAAACCTGACCCTTCTATGAATACTGAATTTCTAAATGTACTAAGATCAAGATGCAATGAAACTGATGCATTGTCAATTTCAGCATCAGGATATACATCGCATGCCTCGTCTTCTTCCTTAGCTGAAGAACAACAAAAAATCACTATGGACTCTAGGAAATCGCTATCGGGTTTCGGGATGTTATACTACCGCAGCCTATTGCAAGGTAAAGGAATCCTCTATGCTGACCAGCAGCTAATGGAAGGTGAAAAAACAAAGTATTGGGTTCAAGAATATGCATCTAATCCTACTTTGTTCCGTCAAGATTTTGCACTGGCAATGATGAAACTCTCGGATCTTCGAGTTTTGACAATGCCTATGGGACAGATTCGACGCACTTGTTCAAAAGTTGCATGA 1206 0.3872 MAAPLILPKLTLLILVFCILISFDQHKHNTNNNNNNNKTFNFINTIPFPIHSFSGGPVSLSVTTNKNHYSDSSSSDSNSQSLLEYDFYRNSCPNAERIVRSTLHRVYKTNHTLIPALIRLAFHDCFIQGCDASILLEDDDYIDSEKDSPPNGSLKGFDVIETIKSKLEVACPGVVSCADILVLAARDSVALAGGPFYPLYTGRRDGSNSFADIATDELPSPYADLSQIISSFKLRGFDEREMVTLLGAHNIGVIHCKFFENHLYNLSGTNKPDPSMNTEFLNVLRSRCNETDALSISASGYTSHASSSSLAEEQQKITMDSRKSLSGFGMLYYRSLLQGKGILYADQQLMEGEKTKYWVQEYASNPTLFRQDFALAMMKLSDLRVLTMPMGQIRRTCSKVA* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0623 401 PRINTS Haem peroxidase superfamily signature 114 128 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Haem peroxidase superfamily signature 175 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Haem peroxidase superfamily signature 193 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PANTHER PEROXIDASE 25-RELATED 69 399 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 Pfam Peroxidase 99 365 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 Gene3D - 86 400 - -
Tpr4g0623 401 ProSiteProfiles Plant heme peroxidase family profile. 82 401 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Plant peroxidase signature 92 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Plant peroxidase signature 116 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Plant peroxidase signature 155 168 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Plant peroxidase signature 174 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Plant peroxidase signature 193 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Plant peroxidase signature 240 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Plant peroxidase signature 335 352 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PRINTS Plant peroxidase signature 375 388 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 Gene3D Peroxidase, domain 2 219 380 - -
Tpr4g0623 401 SUPERFAMILY Heme-dependent peroxidases 83 400 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr4g0623 401 PANTHER PEROXIDASE 69 399 - -
Tpr4g0623 401 CDD secretory_peroxidase 83 400 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0623 Tpr-Chr4 5822694 5837014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0623 80 400 Peroxidase AT4G33870 49.702 7.20e-119 349
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0623 K00430 - nnu:104595436 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0623 4 5822694 5837014 Tpr4g0623 4 5822694 5837014 ECH