Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0609 ATGCCAAAGAACATTCGAAAATCCCTTCAAAAAATTTTCTACAGAATCAAAACTCATCCTAGGTCACAAAAATTCGGCTTATCCTCTAAGAAATGGATTGATATCAATGCTTGCAAACATTCTAGAACTCTTTCTTTCTCGTTGGACGACAAAAACAATGACAACAACAACAAGAAGAATTACGATGAAGCTACACTATCCGACATTGACCGTTTTCTCTTTGAGAATTTTAAATCTTTATTCCTTGAAGATGACGAAAAAACTGATTGTAATCACGACACTAAACGGGCCGTCTCATTAGATGAAGATGGAGAAGATGAAGATGAAGCGGAAGAAGAAGAAAAAACTCGAGAAGAAAAATATCCAAAATTGGGTCCCATATTTTTCGATCCATCTGAGGAAAGACCGTTGGATCTTCGTGGATCTAATAGATTCTTTTTGACACGTGGCTTCTCGGGGTCCATGTCGAACACAACATCAACAACTACAACAAACACATTTGAAGAAATGGGATCATGCTCAAACTCATCAACCCCAAAAAAATTCAATAATAATAATAATTCATCTTCAAAAGATGATCAAGTGAATATTCCTCATAATTGTGTTGTTGTGTTGGCTAGTTCGCCAAATCCTTACGATGATTTTCGAAGATCCATGGAAGAAACAGTGGAAGCAAGATTGAGGAACAATCAATGTGTGGATTGGGATTTTATGGAAGAGCTTTTGTTTTGTTATATGAACTTGAATGAAAAGAAATCATATAAGTTTATATTAAGTGCTTATTGTGACTTGATCAGTCTCATGAGACAAAGTTCAGAGACTGAACCGACGAAGCCGCGGAGCGTTCGGACTGTTAGGATTGGGAGGGAGGTAAGGAAGACTAAAGAATTAACATTAGAATTTGCAGGTTCAAGATAA 918 0.3649 MPKNIRKSLQKIFYRIKTHPRSQKFGLSSKKWIDINACKHSRTLSFSLDDKNNDNNNKKNYDEATLSDIDRFLFENFKSLFLEDDEKTDCNHDTKRAVSLDEDGEDEDEAEEEEKTREEKYPKLGPIFFDPSEERPLDLRGSNRFFLTRGFSGSMSNTTSTTTTNTFEEMGSCSNSSTPKKFNNNNNSSSKDDQVNIPHNCVVVLASSPNPYDDFRRSMEETVEARLRNNQCVDWDFMEELLFCYMNLNEKKSYKFILSAYCDLISLMRQSSETEPTKPRSVRTVRIGREVRKTKELTLEFAGSR* 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0609 305 ProSiteProfiles OVATE domain profile. 204 267 IPR006458 -
Tpr4g0609 305 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 202 267 IPR006458 -
Tpr4g0609 305 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 3 288 - -
Tpr4g0609 305 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 3 288 IPR038933 GO:0045892
Tpr4g0609 305 Pfam Transcriptional repressor, ovate 208 266 IPR006458 -
Tpr4g0609 305 MobiDBLite consensus disorder prediction 96 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0609 Tpr-Chr4 5717635 5718781 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tpr4g0609 Ovate 2.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0609 - - mtr:MTR_4g012060 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0609 4 5717635 5718781 Tpr4g0609 4 5717635 5718781 ECH
Tpr7g4939 7 57141080 57142403 Tpr4g0609 4 5717635 5718781 PCT