Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0608 ATGAGCGTGGTAGGTTTTGATTTTGGTAATGAGAGTTGCATTGTTGCGGTTGCTAGACAGAGAGGTATTGATGTCGTGTTAAACGATGAATCCAAACGTGAAACTCCTGCTATTGTTTGTTTCGGTGAAAAGCAGCGTTTTATTGGTACTGCTGGTGCTGCTTCAACTATGATGAATCCTAAGAATTCAGTTTCACAGATTAAGAGACTTATTGGGAAGAAATTTTCTGATCCCGATTTGCAGAGTGATCTTAAGTCTTTACCTTTTAGTGTCAGTGAAGGACCTGATGGGTATCCTTTGATTCATGCTAGGTATTTAGGGGAAGTTAAGACGTTTACACCTACACAAGTGTTTGCGATGATGTTGTCGAATATGAAAGAGATAGCTACGAAAAATCTTAATGCTGCGGTTCATGATTGTTGCATTGCGATTCCGGTTTATTTTACTGATCTTCAGAGAAGGGCTGTTTTGGATGCTGCAACTATTGCTGGTTTGCACCCACTTCGGTTGCTTCATGAAACTACTGCGACTGCTTTGGCGTATGGGATTTATAAGACAGATCTGTCTGAAACTGATCCGCTGAATGTGGCCTTTGTGGATATTGGACATGCTAGTATGCAGGTGTGCATTGCTGGATTCAAAAAGGGGCAGCTGAAAGTGTTGGCTCATTCGTTCGATAGGTCTCTTGGTGGTAGGGATTTTGATGAGGTTTTGTTTCATCATTTTGCTGGGAAGTTTAAGGAGGAGTACAAAATCGATGTGCTTCAGAATGCTAGGGCATGTCTGAGGCTTAGGGCTTCTTGTGAGAAGATGAAGAAGATGCTCAGTGCAAATCCTGTGGTACCCATGAACATTGAGTGCTTGATGGATGAGACAGATGTGAAGGGTATCATGAAGCGTGAGGAGTTTGAGGAACTGAGTCTCCCTATTTTGGAGCGTGTCAAGGGACCTTTGGAGAAGGCACTTGCCGACGCAGGACTCTCAGTTGATGACATACATATGGTTGAGGTTGTTGGTTCGGGCTCTCGCGTACCAGCTATAAACAAAATTTTGACCGAGTTTTTCAAGAAGGAGCCTAGGCGGACAATGAACGCTAGTGAATGTGTTGCTAAAGGAGCTGCATTGCAATGCGCTATTCTTAGCCCAACATTTAAAGTGCGAGAATTTCAGGTCAATGAAAGCTTCCCTTTCTCAATTTCCCTTGCATGGAAAGGTTCCGGTCCAGATGCACAGGATACTGTACCCGATAATCAGCAGAGTTCCCTTGTTTTTCCCAAGGGTAATCCTATACCAAGTATCAAGGCACTGACATTCTACAGGTCCGGAACATTTACCATTGATGTACAGTATAGTGATGCGAGTGGGCAACAAACACCTTCAAGGATAAGCACATATACTATTGGTCCTTTCGAAGTTAAACAAAGCGAAAAGGCAAAAGTTAAAGTGAAAGTTCGTTTGAATGTGCATGGAATTGTTTCTGTTGACCTGGCAACTGTAAGTTTTCTACTCCTAGAAGAGGAAGAAGTTGAGGCTTCAGTTTCCAAAGAATCAGCAAGCGAACCTACTAAGATGGATGCTGATGAAGCTCCTGCTGATGCTGCTGCTGCACCTCCCAATGGCAATGACGCTGATGTTAATATGCAAGATGCAAAGGCTAATGCTGATACCCCTGGCGTTGAAAATGGCATCCCTGAGAATGGAGATAAGCCTGCACAAATGGATGTTGATGATACCAAGGTCCCAAAGAAAAAGGTTAAGAAAACAAATGTTCCTGTGGCTGAGTTAGTTTATGGAGCAATGTCACCTGCGGATGTCCAGAAAGCTTCGGAGAAGGAGTATGAAATGGCTTTGCAAGATCGTGTAATGGAAGAAACAAAGGACAAGAAAAATGCAGTAGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCATGAGTTTGTCATTGCTTCTGAGAGGGAAGGTCTTACTGCGAAACTTCAGGAGGTGGAAGATTGGCTATATGAGGACGGTGAAGATGAAACTAAAGGGGTATATATTGCAAAACTTGAAGAGCTCAAAAAGCAAGGTGACCCGATTGAAGAGCGTTACAAAGAATACACGGAGAGGGGTGCAATAATTGATCTGTTCAACAATGTTTTAGCTAGTTACAGAGAAGCTGCAATGTCAGCCGATCCCAAATTTGATCACATTGACATCAACGAAAAACAGAAGGTCTTAAATGAATGTGTTGAAGCTGAGAACTGGCTTAGGGAGAAGAAGCAGCAGCAAGACGCACTTCCAAAACATGCCAACCCTGTACTATTGGTAGCTGAAATAAGAAAGAAAGCTGAGGCCCTTGATAGGTTCTGCAAGCCAATTATGACAAAGCCAAGGCCGGCCAAGCCAGCTGCTCCACAAGCACCGCCAAGTCCAGCTTCTTCAGGTTCTGAGCAGCAGCAATCTCATGCAGATGAGAATGCCAGCACAAATGAAAATACCGGGGATGATGGTAATCAGGCTTCATCAGCATCCAGTGAACCTATGGAGACTGATAAACCAGACAATGCTGGTTCTGCATAA 2571 0.4337 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFIGTAGAASTMMNPKNSVSQIKRLIGKKFSDPDLQSDLKSLPFSVSEGPDGYPLIHARYLGEVKTFTPTQVFAMMLSNMKEIATKNLNAAVHDCCIAIPVYFTDLQRRAVLDAATIAGLHPLRLLHETTATALAYGIYKTDLSETDPLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFAGKFKEEYKIDVLQNARACLRLRASCEKMKKMLSANPVVPMNIECLMDETDVKGIMKREEFEELSLPILERVKGPLEKALADAGLSVDDIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGAALQCAILSPTFKVREFQVNESFPFSISLAWKGSGPDAQDTVPDNQQSSLVFPKGNPIPSIKALTFYRSGTFTIDVQYSDASGQQTPSRISTYTIGPFEVKQSEKAKVKVKVRLNVHGIVSVDLATVSFLLLEEEEVEASVSKESASEPTKMDADEAPADAAAAPPNGNDADVNMQDAKANADTPGVENGIPENGDKPAQMDVDDTKVPKKKVKKTNVPVAELVYGAMSPADVQKASEKEYEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYHEFVIASEREGLTAKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEYTERGAIIDLFNNVLASYREAAMSADPKFDHIDINEKQKVLNECVEAENWLREKKQQQDALPKHANPVLLVAEIRKKAEALDRFCKPIMTKPRPAKPAAPQAPPSPASSGSEQQQSHADENASTNENTGDDGNQASSASSEPMETDKPDNAGSA* 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0608 856 PANTHER HSC70CB, ISOFORM G-RELATED 1 855 - -
Tpr4g0608 856 Gene3D Actin; Chain A, domain 4 230 313 - -
Tpr4g0608 856 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 722 800 IPR029048 -
Tpr4g0608 856 Pfam Hsp70 protein 3 701 IPR013126 GO:0005524|GO:0140662
Tpr4g0608 856 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Tpr4g0608 856 CDD HSPA4_like_NDB 2 381 - -
Tpr4g0608 856 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 597 IPR029047 -
Tpr4g0608 856 Gene3D - 600 709 IPR029048 -
Tpr4g0608 856 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 633 IPR029047 -
Tpr4g0608 856 MobiDBLite consensus disorder prediction 791 856 - -
Tpr4g0608 856 PRINTS 70kDa heat shock protein signature 2 15 - -
Tpr4g0608 856 PRINTS 70kDa heat shock protein signature 30 42 - -
Tpr4g0608 856 PRINTS 70kDa heat shock protein signature 140 160 - -
Tpr4g0608 856 PRINTS 70kDa heat shock protein signature 332 348 - -
Tpr4g0608 856 PRINTS 70kDa heat shock protein signature 363 383 - -
Tpr4g0608 856 PRINTS 70kDa heat shock protein signature 477 493 - -
Tpr4g0608 856 Gene3D - 38 113 - -
Tpr4g0608 856 Gene3D - 186 360 - -
Tpr4g0608 856 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Tpr4g0608 856 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 855 - -
Tpr4g0608 856 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 602 700 IPR029048 -
Tpr4g0608 856 Gene3D - 713 794 IPR029048 -
Tpr4g0608 856 ProSiteProfiles Ig-like domain profile. 345 463 IPR007110 -
Tpr4g0608 856 Gene3D - 5 374 - -
Tpr4g0608 856 MobiDBLite consensus disorder prediction 511 532 - -
Tpr4g0608 856 MobiDBLite consensus disorder prediction 807 856 - -
Tpr4g0608 856 MobiDBLite consensus disorder prediction 511 527 - -
Tpr4g0608 856 Coils Coil 686 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0608 Tpr-Chr4 5710622 5715863 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0608 4 494 Calmodulin-binding Proteins AT1G16030 33.467 2.33e-87 289
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0608 4 5710622 5715863 Tpr4g0608 4 5710622 5715863 ECH