Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0607 ATGAGTGTGGTGGGTTTTGATTTTGGTAACGAGAGTTGCATTGTTGCGGTTGCTAGACAGAGAGGTATTGATGTTGTGTTAAACGATGAATCCAAACGTGAAACTCCTGCTATTGTTTGTTTCGGTGAAAAGCAGCGTTTTATTGGTACTGCTGGTGCTGCTTCAACTATGATGAATCCTAAGAATTCAGTTTCACAGATTAAGAGACTTATTGGGAAGAAATTTTCTGATCCTGATTTGCAGAGTGATCTTAAGTCTTTACCTTTTAGTGTCAGTGAAGGACCTGATGGGTATCCTTTGATTCATGCTAGGTATTTAGGGGAAGTTAAGACGTTTACACCTACACAAGTGTTTGCGATGATGTTGTCGAATATGAAAGAGATAGCTACGAAAAATCTTAATGCTGCGGTTCATGATTGTTGCATTGCGATTCCGGTTTATTTTACTGATCTTCAGAGAAGGGCTGTTTTGGATGCTGCAACTATTGCTGGTTTGCACCCACTTCGGTTGCTTCATGAAACTACTGCAACTGCTTTGGCGTATGGGATTTATAAGACAGATCTGTCTGAAACTGATCCTCTGAATGTGGCCTTTGTGGATATTGGACATGCTAGTATGCAGGTGTGCATTGCTGGATTCAAAAAGGGGCAGCTGAAAGTGTTGGCTCATTCTTTCGATAGATCTCTTGGTGGTAGGGATTTTGATGAGGTTTTGTTCCATCATTTTGCTGGGAAGTTTAAGGAGGAGTACAAAATTGATGTGCTTCAGAATGCTAGGGCATGTTTGAGGCTTAGAGCTGCTTGTGAGAAGATGAAGAAGATGCTCAGTGCAAATCCTGTGGTGCCCCTGAATATTGAGTGCTTGATGGATGAGAAGGATGTGAAGGGTATCATGAAGCGTGATGAGTTTGAGGAACTGAGTCTCCCGATTTTGGAGCGTGTCAAGGGACCTTTGGAGAGGGCACTTGCCGAAGCAGGACTCTCTGTTGATGATATTCATATGGTTGAGGTCGTTGGTTCGGGCTCTCGTGTACCGGCTATAAACAAAATTTTGACCGAGTTTTTCAAGAAGGAGCCTAGGCGGACAATGAACGCTAGTGAATGTGTTGCTAAAGGAGCTGCATTACAATGTGCTATTCTTAGCCCAACGTTTAAAGTGCGAGAATTTCAGGTCAACGAAAGCTTTCCTTTCGCAATTTCTCTTGCATGGAAAGGTTCTGCTCCAGATGCACAGGATAGTGGACCTGATAATCAGCAGAGTTCCCTTGTTTTTCCCAAGGGTAATCCCATACCCAGTATCAAGGCACTGACATTCTACAGGTCAGGAACATTTTCCATTGATGCACAATATAGTGATGTGCCTGGGCAACAAACACCAGCAAGGATCAGCACATATACCATCGGTCCTTTTGAAGCTAAACAAAGCGAAAAGGCAAAAGTTAAAGTGAAAGTTCGTTTGAATGTGCATGGAATTGCATCTGTTGACCTGGCAACTCTCCTGGAAGAGGAAGAAGTTGAGGCTTCAGTTTCCAAAGAATCAGCAAGCGAACCTAGTAAGATGGAGGCTGATGAAGCTCCTGCTGATGCTGCTGCTGCACCTCCCAATGGCAATGATACTGATGTTAATATGCAAGATGCAAAGGCTAATGCTGATACCCCCGGGGTTGAAAATGGCGTCCCTGATAATGGAGATAAGCCTGCACAAATGGACGTGGATGATTCAAAGGTTGCGAAGAAAAAGGTTAAGAAAACAAATGTTCCGGTGGCTGAGTTAGTTTATGGAGCAATGTCACCTGCGGATGTCCAGAAAGCTTTGGAGAAGGAGTATGAAATGGCTTTGCAAGATCGTGTAATGGAAGAAACAAAGGACAAGAAAAATGCAGTAGAGGCTTATGTTTATGACATGAGAAACAAGCTTAATGACAAATACCATGAGTTTGTCATTGCTTCAGAGAGGGAAGGTCTTACAACTAAACTTCAGGAGGTGGAAGATTGGCTATATGAGGACGGTGAAGATGAAACTAAAGGAGTATATATTGCAAAACTTGAAGAGCTCAAAAAGCAAGGTGACCCAATCGAAGAGCGTTACAAAGAATACGAGGAGAGGGGTTCAATAGTTGATCAGTTCAACTCTGTTATAGCTAGTTACAGAGAAGCTGCAATGTCGACTGATCCCAGATTTGATCACATTGACATTAACGAGAAACAGAAGGTCTTAAATGAATGCGTTGAAGCGGAGAACTGGCTTAGGGAGAAGAAGCAGCAGCAAGACTCACTTCCAAAATATGCCAACCCTGTACTCTTGGTAGCTGAGATAAGAAAGAAAACTGAGGCTGTCGATAGGTTATGCAAGCCAATTATGACAAAACCAAGGCCAGCCAAGCCAGCTGCTCCACAAGCACCGCCAAGCCCAGCTTCTTCGGGTTCGGAGCAGCAGCAACCTCCGGCAGATGAGAATGCCACCAATGAGAATACCGGGGAAGATGGTAGTAATCAGGCTTCATCAGCATCCACCGAACCAATGGAGACTGATAAGCCAGAGAATGCCGGTTCTGCATAA 2559 0.4373 MSVVGFDFGNESCIVAVARQRGIDVVLNDESKRETPAIVCFGEKQRFIGTAGAASTMMNPKNSVSQIKRLIGKKFSDPDLQSDLKSLPFSVSEGPDGYPLIHARYLGEVKTFTPTQVFAMMLSNMKEIATKNLNAAVHDCCIAIPVYFTDLQRRAVLDAATIAGLHPLRLLHETTATALAYGIYKTDLSETDPLNVAFVDIGHASMQVCIAGFKKGQLKVLAHSFDRSLGGRDFDEVLFHHFAGKFKEEYKIDVLQNARACLRLRAACEKMKKMLSANPVVPLNIECLMDEKDVKGIMKRDEFEELSLPILERVKGPLERALAEAGLSVDDIHMVEVVGSGSRVPAINKILTEFFKKEPRRTMNASECVAKGAALQCAILSPTFKVREFQVNESFPFAISLAWKGSAPDAQDSGPDNQQSSLVFPKGNPIPSIKALTFYRSGTFSIDAQYSDVPGQQTPARISTYTIGPFEAKQSEKAKVKVKVRLNVHGIASVDLATLLEEEEVEASVSKESASEPSKMEADEAPADAAAAPPNGNDTDVNMQDAKANADTPGVENGVPDNGDKPAQMDVDDSKVAKKKVKKTNVPVAELVYGAMSPADVQKALEKEYEMALQDRVMEETKDKKNAVEAYVYDMRNKLNDKYHEFVIASEREGLTTKLQEVEDWLYEDGEDETKGVYIAKLEELKKQGDPIEERYKEYEERGSIVDQFNSVIASYREAAMSTDPRFDHIDINEKQKVLNECVEAENWLREKKQQQDSLPKYANPVLLVAEIRKKTEAVDRLCKPIMTKPRPAKPAAPQAPPSPASSGSEQQQPPADENATNENTGEDGSNQASSASTEPMETDKPENAGSA* 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0607 852 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 387 593 IPR029047 -
Tpr4g0607 852 Gene3D - 5 374 - -
Tpr4g0607 852 Gene3D - 38 113 - -
Tpr4g0607 852 SUPERFAMILY Actin-like ATPase domain 195 380 IPR043129 -
Tpr4g0607 852 Gene3D - 702 802 IPR029048 -
Tpr4g0607 852 CDD HSPA4_like_NDB 2 381 - -
Tpr4g0607 852 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 711 796 IPR029048 -
Tpr4g0607 852 PANTHER HSC70CB, ISOFORM G-RELATED 1 851 - -
Tpr4g0607 852 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 598 696 IPR029048 -
Tpr4g0607 852 Pfam Hsp70 protein 3 697 IPR013126 GO:0005524|GO:0140662
Tpr4g0607 852 Gene3D - 596 701 IPR029048 -
Tpr4g0607 852 PANTHER HEAT SHOCK 70 KDA PROTEIN 14 1 851 - -
Tpr4g0607 852 Gene3D - 186 360 - -
Tpr4g0607 852 Gene3D Actin; Chain A, domain 4 230 313 - -
Tpr4g0607 852 PRINTS 70kDa heat shock protein signature 2 15 - -
Tpr4g0607 852 PRINTS 70kDa heat shock protein signature 30 42 - -
Tpr4g0607 852 PRINTS 70kDa heat shock protein signature 140 160 - -
Tpr4g0607 852 PRINTS 70kDa heat shock protein signature 332 348 - -
Tpr4g0607 852 PRINTS 70kDa heat shock protein signature 363 383 - -
Tpr4g0607 852 SUPERFAMILY Actin-like ATPase domain 1 185 IPR043129 -
Tpr4g0607 852 MobiDBLite consensus disorder prediction 786 852 - -
Tpr4g0607 852 MobiDBLite consensus disorder prediction 507 528 - -
Tpr4g0607 852 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 384 629 IPR029047 -
Tpr4g0607 852 MobiDBLite consensus disorder prediction 803 852 - -
Tpr4g0607 852 MobiDBLite consensus disorder prediction 507 523 - -
Tpr4g0607 852 Coils Coil 682 702 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0607 Tpr-Chr4 5698361 5704402 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0607 4 438 Calmodulin-binding Proteins AT1G16030 34.932 1.39e-85 284
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0607 K09489 - gmx:100813658 1308.89