Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0603 ATGATTGGAAATGGCGGTACCTTATCCCAAGGTTCTGTCTTATGTTACGCTTGTCAAATGCCTGCTAAGGTTGCTGTCTCAAGTGTCCGAAGTTTTTGGGGACATAGTTTACAAAATAAACCAAGAGGAATGGCATTCACAGACATGTCTGCTACGTCGAGCCTGCTGTTAAGTGGGGGTCAAAATCTTCTGTTTCGTACTATCCCTGTGTTACCTAGTCTACGCAAATCTTGTAAGTCCCCTCGAGCGATGAAGGATGGCGCTGCTGGCTATCGATACCCTCCGATGACAAAAAAACCAAGATGGTGGTGGAGAACATTATCATGCATCCCTTACCTCTTACCTTTCCATCAAGTATGGATGTATGCTCAGACAGCATACAATCTTCACCCGTTTCTCGAGAGTTTCGAATACTATACATACCCTTTTCTTAGGTCAATTGGGAGCCTACCTAGATGGTCTCTCATAGCATACTTTGTGATTGCATATCTTACAATTGTGAGGAGAAAAGAATGGCCTCATTTCTTCAGATATCATGTTGCATTAGGAATGTTAATCGAGATAGCCCTGCAGGTTACAGGCATTGTGAGCCGTTGGATGCCAAAATCATTCTATTGGGGTAAACTTGGAATGCATTTCTGGACTACTGCATTTTTCATTTTTCTCTTTACTACCATAGAGTGCATTAGGTGTGCCCTTGTTGGTATGTATGCCGATATCCCTTTTGTCTGTGATGCAGCATATATCCAAATACCATATGAATAA 765 0.4222 MIGNGGTLSQGSVLCYACQMPAKVAVSSVRSFWGHSLQNKPRGMAFTDMSATSSLLLSGGQNLLFRTIPVLPSLRKSCKSPRAMKDGAAGYRYPPMTKKPRWWWRTLSCIPYLLPFHQVWMYAQTAYNLHPFLESFEYYTYPFLRSIGSLPRWSLIAYFVIAYLTIVRRKEWPHFFRYHVALGMLIEIALQVTGIVSRWMPKSFYWGKLGMHFWTTAFFIFLFTTIECIRCALVGMYADIPFVCDAAYIQIPYE* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0603 254 Pfam Chloroplast import apparatus Tic20-like 75 247 IPR005691 -
Tpr4g0603 254 PANTHER HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED 21 254 - -
Tpr4g0603 254 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 21 254 IPR005691 -
Tpr4g0603 254 TIGRFAM 3a0901s05TIC20: chloroplast protein import component, Tic20 family 1 254 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0603 Tpr-Chr4 5663606 5665804 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0603 41 250 Chloroplast and Mitochondria Gene Families AT4G03320 35.294 3.14e-39 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0603 - - gmx:100818669 369.392