Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0591 ATGGAACACAAGGTTTATTTCGAAATGGGTGACTCAATTACTGATAAGGTGTTTGAAGCAACGTGGAACTCGCTAGAAGCAGCTGTGAAGATTGTTCCGATCCAGAGTGAAAAGGCAAATATTGAAATTAAAGCATATCAACATTTGAACGACGTGCCAAGAGTCGTTCGATGTTTTGACCATCTCAAGGATGAAAATCACCATTACATCTTCTTGCAACGAGCCAAATGTAATTTGCGGGAATTGATAAACGCTTGTAAAAAAAAAGGTGTATTTGATCATCAGAATGAAAACTGTAGAGATTTTTTGAAAAAAGCTTCAAAGGATTATCGTCTGTGGCACACACCTGATCGTCATGAAAAAATAAGAGTAAAAGGGGCCCCGGATCAACAATCGGCAAGTCCTGATTTGCTTACACTAATACGGGATATAATCGATGGCGTGACAGACCTTCAAAAGAAGAAGATAAGACATGAGAATCTCACTCCGGATAATATTTTAATATTTGAGGAGATTAATGAGCCGCCCTATAAAAACCGTCTTCGTGCAAAAATCTCTAATCTAGGTTCTTCATCTCCGTCATCCGATAACCTTGTGCTTGATACCAGCACCGCGGGCTGGAGGACGCCCGAAGAAATCAAACAGAAACTTACAGATGAAAAATCCGATTTATTTGGATTAGGATTAGTAATCTGTTTTTGCTTGACAGCATCGCATGCTTTTGGAAATGATGAAAATGTTCGACATAATATTATGGATACTTCAGTTACAAGCCGTCTTTCACCTGTGGATAAAGATTTTATCACTGGATTATTAAAAGCTTTACCAGATGACAGGTCAGTTGCTTCCTCATTATTATTGCATCCCACATTTTGGGATGATACAACTAAAGCCTGGTTTATATGGGAGATTAATGATCTGTTGCATCGTTTAGATTGGGCTGAGTTCAATCAATTTAATTTGAAGAAACAGTTGATTTTTAACGGTTACCAAAAATGGGATTGTTTTATTGACCACGAAGTTCTGATGTGCTATACTAAGGATTTCAAAAATGACTATAATGAATACTCGTTGCAATCTTTAGTAAAGATGTTTAGGAACATATGTGCGCATCTCAATGAATATGAGGCTCTTGGTTTGTGTGTGTCAACAAGAGGAAAGATTTTTGTTGGAAAATCGAAGGCATCAGTGTATCGTTCCCTGATCGAGTACAGGTTTCCTCGTCTTCTGATTGAAGCATATAATCATGTTAAACTACATCGGCAAACAGATGAACCATTCGAATGGTTATTTCCAAAATGA 1302 0.3756 MEHKVYFEMGDSITDKVFEATWNSLEAAVKIVPIQSEKANIEIKAYQHLNDVPRVVRCFDHLKDENHHYIFLQRAKCNLRELINACKKKGVFDHQNENCRDFLKKASKDYRLWHTPDRHEKIRVKGAPDQQSASPDLLTLIRDIIDGVTDLQKKKIRHENLTPDNILIFEEINEPPYKNRLRAKISNLGSSSPSSDNLVLDTSTAGWRTPEEIKQKLTDEKSDLFGLGLVICFCLTASHAFGNDENVRHNIMDTSVTSRLSPVDKDFITGLLKALPDDRSVASSLLLHPTFWDDTTKAWFIWEINDLLHRLDWAEFNQFNLKKQLIFNGYQKWDCFIDHEVLMCYTKDFKNDYNEYSLQSLVKMFRNICAHLNEYEALGLCVSTRGKIFVGKSKASVYRSLIEYRFPRLLIEAYNHVKLHRQTDEPFEWLFPK* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0591 433 Pfam Ribonuclease 2-5A 329 428 IPR010513 GO:0004540|GO:0006397
Tpr4g0591 433 Gene3D Transferase(Phosphotransferase) domain 1 129 310 - -
Tpr4g0591 433 ProSiteProfiles Protein kinase domain profile. 3 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0591 433 Pfam Protein kinase domain 17 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0591 433 Gene3D Transferase(Phosphotransferase) domain 1 2 123 - -
Tpr4g0591 433 SMART serkin_6 7 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0591 433 Gene3D KEN domain 314 427 IPR038357 -
Tpr4g0591 433 PANTHER IRE1-RELATED 17 425 IPR045133 GO:0004521|GO:0004674|GO:0030968
Tpr4g0591 433 ProSiteProfiles KEN domain profile. 294 433 IPR010513 GO:0004540|GO:0006397
Tpr4g0591 433 SUPERFAMILY Protein kinase-like (PK-like) 15 298 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0591 Tpr-Chr4 5522049 5524417 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0591 135 347 MAP Kinase Kinase Gene Family AT5G40440 25.652 5.32e-07 50.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK IRE1 Tpr4g0591 Pkinase 1.4e-17 CL0016