Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0571 ATGGAGTCCTTAAAATCACCTTTTAAGGGAATTGTTAGTGACATAAGAGGAAGAGCACAATGTTATAAAGATGATTGGACTTGTGCTTTTCGTTCTGGTATTGGGATATTAGCTCCAACTACCTATATTTTTTTCGCTTCGGCTTTACCTGTTATTGCCTTCGGCGAGCAGCTGAATCGAGACACAGATGGAAGACTGAGCACAGTAGAAACACTAGCTTCTACGGCCATTTGTGGAATGATACATTCAATAATTGGAGGTCAACCACTCCTTATTGTAGGAGTTGCAGAACCCACCATCATTATGTATACCTACTTGTACAACTTTGCTAAAAATAAAGATGACTTGGGACAAGAACTCTTTTTGGCTTGGGCTGGATGGGTTTGTGTATGGACATCTCTCTTGCTGTTTCTCCTAGCAATATTCAATGCTGGCAATATCATCAACAGATTTACGAGGGTTGCTGAAGAGCTTTTTGGAATGCTGATTTCAGTCTTGTTTATTCAAGAGGCTATTAAGGGAATGATAAAAGAGTTTAGTGCTCCTAAAAATGAAAACTCAATATTAGAGCACAACCAATTTCATTGGCTTTATGTGAATGGCTTACTTGGTATTATATTCACATTTGGCCTTCTATATACAGCATTGAAGAGCAGAAGAGCAAGATCATGGTTATATGGGACAGGTTGGTTGAGAAGCTTTATTGCAGACTATGGTGTGCCTTTCTTGGTGGTAGTATGGACAGTTGTGTCATTTTCTGTGCCAAGCAAAATACCTTCTGAAATTCCAAGAAGACTAGTTGCTCCCCTGGCTTGGGAATCTACATCTTTACACCATTGGACAGTTATCAAAGACATGGGAACGGTTTCTCCAACATATATTTTTGCTGCTTTTATACCTGCATTGATGGTAGCAGGGCTTTACTTCTTTGATCATAGTGTTGCTTCTGGGATGGCACAACAAAAGGATTTCAATCTCAAGAAACCTTCTGCATACCATTATGACATATTCTTACTAGGATTCATGACTTTGATATGTGGACTACTTGGCTTGCCTCCTTCAAATGGTGTTCTTCCTCAATCACCTATGCACACTAAGAGCCTCGCAGTTCTTAAGGGTCTGATGATTAGAAGAAAGATGGTTGAAAGTGCCAAGGAAAGCATAAGAAAGAAAGCTAGCAACTCTGAAATCTATGGAAAGATGCAAGCAGTGTTTGTAGAAATGGACAGCAGCCCAGTTACTTCTGTGGAAAGAGAATTAGAGAACTTAAAAGAGGTTGTCCTAAAAGGTGAAGATAAAGGAGACAACAAGAAGGATACATTTGACCCTGAGAAGCATATTGATGCATGTTTGCCTGTTAGAGTAAATGAGCAAAGAATGAGCAATCTTTTACAATCACTGTTTGTTGGAGCATCAGTGTTTGCTATGCCTCTCATAAAAAATATTCCAACTTCTGTTTTGTGGGGATACTTTGCTTACATGGCCATTGATAGTCTTCCTGGTAACCAATTCTGGGAAAGGATATTACTTCTCTTTGTAACACCTAGTAGGTGGTTCAAGTTATTGGAAGGTCATCATGCTTCTTTTGTGGAATCAGTACCAATTAGATACATAGTCTTCTTCACAATATTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTAACATGGATTCCAATAGCTGGAATCTTGTTTCCCTTGCCTTTCTTCTTACTTATCTTGGTGAGGCAATATATCCTTCCTAAGATATTTAGTCCTCATCATCTAAGAGAACTAGATGCAGCTGAATATGAAGAAATTGCTGGTGCTCCAAGACTCTCTCAGAGGGATTCACCTAGTTTTGGATCAATGGAAGTGTCTGATAGTGAAATATTAGATGAGTTAACTACCAGTAGAGGAGAGTTGAAGGTCAGAACTCTAAGCTTTAGAGAGGAAAGACATGGTCAAATGATCTATCCTAATGAAATAGTATGTGAAGATGAATAA 1986 0.3872 MESLKSPFKGIVSDIRGRAQCYKDDWTCAFRSGIGILAPTTYIFFASALPVIAFGEQLNRDTDGRLSTVETLASTAICGMIHSIIGGQPLLIVGVAEPTIIMYTYLYNFAKNKDDLGQELFLAWAGWVCVWTSLLLFLLAIFNAGNIINRFTRVAEELFGMLISVLFIQEAIKGMIKEFSAPKNENSILEHNQFHWLYVNGLLGIIFTFGLLYTALKSRRARSWLYGTGWLRSFIADYGVPFLVVVWTVVSFSVPSKIPSEIPRRLVAPLAWESTSLHHWTVIKDMGTVSPTYIFAAFIPALMVAGLYFFDHSVASGMAQQKDFNLKKPSAYHYDIFLLGFMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKGLMIRRKMVESAKESIRKKASNSEIYGKMQAVFVEMDSSPVTSVERELENLKEVVLKGEDKGDNKKDTFDPEKHIDACLPVRVNEQRMSNLLQSLFVGASVFAMPLIKNIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWFKLLEGHHASFVESVPIRYIVFFTIFQCVYFLVCFGVTWIPIAGILFPLPFFLLILVRQYILPKIFSPHHLRELDAAEYEEIAGAPRLSQRDSPSFGSMEVSDSEILDELTTSRGELKVRTLSFREERHGQMIYPNEIVCEDE* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0571 661 Gene3D Helical hairpin bin 18 60 - -
Tpr4g0571 661 Coils Coil 413 433 - -
Tpr4g0571 661 Pfam HCO3- transporter family 198 371 IPR011531 GO:0006820|GO:0016021
Tpr4g0571 661 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016021
Tpr4g0571 661 Pfam HCO3- transporter family 453 543 IPR011531 GO:0006820|GO:0016021
Tpr4g0571 661 PANTHER BORON TRANSPORTER 4-RELATED 1 655 - -
Tpr4g0571 661 PANTHER ANION EXCHANGE PROTEIN 1 655 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0571 Tpr-Chr4 5325320 5331675 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0571 1 657 Antiporters AT1G74810 69.115 0.0 959
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0571 K24194 - gmx:100811184 1051.2