Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0570 ATGAAGTGCTTAAAATCACCTTTTAAAGGAATTGTCAGTGATATAAGAGGAAGAGCACAATGCTATAAAGATGATTGGACTTGTGCTTTATGTTCCGGTATTGGGATATTGGCTCCAACTACCTATATTTTCTTTGCTTCTGCTTTACCTGTTATTGCCTTCGGCGAGCAGCTGAATCGAGACACAGATGGAAGATTGAGCACAGTAGAAACACTAGCTTCTACAGCCATTTGTGGAATGATACATTCAATAATTGGAGGTCAACCACTCCTTATTGTAGGAGTTGCAGAACCCACCATCATCATGTATACCTACTTGTACAACTTTGCTAAAAATAAGGATGGCTTGGGACAAGAACTCTTTTTGGCTTGGGCTGGATGGGTTTGTGTATGGAGTTCTCTGTTACTGTTTCTCCTAGCAATATTCAATGCTGGCAATATCATCAACAGATTTACAAGGGTTGCTGAAGAGCTTTTTGGAATGCTGATTTCAGTTTTGTTCATTCAAGAGGCTATTAAGGGAATGATAAAAGAGTTTAGTGCTCCTAAAAATGAAAACTCAATATTAGAGCACAACCAATTTCATTGGCTTTATGTGAATGGCTTATTAGGTATTATATTCACATTTGGCCTTCTGTATACAGCATTGAAGAGCATAAGAGCCAGATCATGGTTATATGGGACAGGTTGGTTGAGAAGCTTCATTGCAGACTATGGTGTGCCTTTCATGGTGGTAGTATGGACAGCTGTGTCATTCTTAGTGCCAACAAAACTACCTTCTGAAATTCCAAGAAGACTAATTGCTCCACTGGCTTGGGAATCTACATCTTTACACCATTGGACAGTCATTAAAGACATGGGAAGGGTTTCTCCAACATATATTTTTGCTGCTTTTATACCTGCATTGATGGTAGCAGGACTTTACTTCTTTGATCATAGTGTTGCTTCTGGGATGGCACAACAAAAGGAATTCAATCTCAAGAAACCTTCTGCATACCATTATGACATATTCTTACTAGGATTCATGACTTTGATTTGTGGACTACTTGGCTTGCCTCCTTCAAATGGTGTTCTACCTCAATCACCTATGCACACTAAGAGCCTTGCAATTCTTAAGGGTCTGATGATGAGAAGAAAGATGGTTGAAAGTGCCAAGGAAAGCATAAAAAAGAAAGCTAGCAACTCTGAAATCTATGGAAAGATGCAAGCAGTGTTTGTAGAAATGGACAGCAGCCCGGTTACTTTTGTGGAAAGAGAATTAGAGAACTTAAAAGATGTTGTCCTAAAAGGTGAAGATAAAGGAGAAAACAAGAACGACACATTTGACCTTGAGAAGCATATTGATGCATGTTTGCCTGTTAGAGTAAATGAGCAAAGAATGAGCAATCTTTTACAATCACTGTTTGTTGGAGCATCAGTGTTTGCTATGCCTCTCATAAAAAAGATTCCAACTTCTGTTTTGTGGGGATACTTTGCATACATGGCCATTGATAGTCTTCCTGGTAACCAATTCTGGGAAAGGATATTACTTCTCTTTGTAACACCTAGTAGGTGGTTCAAGTTATTGGAAGGTCCACATGCTTCTTTTGTGGAATCGGTACCAATTAGATACATAGTCTTCTTCACAATCTTCCAATGTGTGTATTTCTTGGTTTGTTTTGGAGTAACATGGATTCCAATAGCTGGAATCTTGTTCCCTTTGCCTTTCTTTTTACTGATCTTGGTGAGGCAGTATATTCTTCCCAAGCTGTTTAGTCCTCATCATCTAAGAGAACTTGATGCAGCTGAATATGAAGAAATTGTTGGTGCTCCAAGACTCTCATTAAGTATAGATTCACCTAGTTTTGGATCAATGGAAGTGTCTGATAGTGAAATATTAGATGAGTTAACTACTAGCAGAGGAGAGTTGAAAGTCAGAACTCTAAGCTTTAGAGAGGAAAAACATGGTCAACCTGCAGGAGATTTATCCTAA 1971 0.3866 MKCLKSPFKGIVSDIRGRAQCYKDDWTCALCSGIGILAPTTYIFFASALPVIAFGEQLNRDTDGRLSTVETLASTAICGMIHSIIGGQPLLIVGVAEPTIIMYTYLYNFAKNKDGLGQELFLAWAGWVCVWSSLLLFLLAIFNAGNIINRFTRVAEELFGMLISVLFIQEAIKGMIKEFSAPKNENSILEHNQFHWLYVNGLLGIIFTFGLLYTALKSIRARSWLYGTGWLRSFIADYGVPFMVVVWTAVSFLVPTKLPSEIPRRLIAPLAWESTSLHHWTVIKDMGRVSPTYIFAAFIPALMVAGLYFFDHSVASGMAQQKEFNLKKPSAYHYDIFLLGFMTLICGLLGLPPSNGVLPQSPMHTKSLAILKGLMMRRKMVESAKESIKKKASNSEIYGKMQAVFVEMDSSPVTFVERELENLKDVVLKGEDKGENKNDTFDLEKHIDACLPVRVNEQRMSNLLQSLFVGASVFAMPLIKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVTPSRWFKLLEGPHASFVESVPIRYIVFFTIFQCVYFLVCFGVTWIPIAGILFPLPFFLLILVRQYILPKLFSPHHLRELDAAEYEEIVGAPRLSLSIDSPSFGSMEVSDSEILDELTTSRGELKVRTLSFREEKHGQPAGDLS* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0570 656 Pfam HCO3- transporter family 202 371 IPR011531 GO:0006820|GO:0016021
Tpr4g0570 656 Pfam HCO3- transporter family 7 182 IPR011531 GO:0006820|GO:0016021
Tpr4g0570 656 Pfam HCO3- transporter family 453 543 IPR011531 GO:0006820|GO:0016021
Tpr4g0570 656 PANTHER BORON TRANSPORTER 4-RELATED 1 650 - -
Tpr4g0570 656 Gene3D Helical hairpin bin 18 60 - -
Tpr4g0570 656 PANTHER ANION EXCHANGE PROTEIN 1 650 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0570 Tpr-Chr4 5314570 5322116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0570 5 650 Antiporters AT1G74810 68.750 0.0 931
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0570 K24194 - gmx:100811184 1045.03