Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g0512 | ATGTCGACTGAAGTACGGGATGAAGTTGATATTGATGAAATTGAACTTCTTACAAATGTTGATTTCCCTCAAATATTTGATAGTGATGATGATGCTTATAATTTTTACTCTTCGTTTGCACAAAGAAGTGGTTTCTCAATTAGACGTCATCACGTTTATAGAAACACTACTGATGAGGGAAATCCAGAAACAGTTTACAAAAGAGAGTTCGTTTGCCATCGATCCGGGGTTTCTAAACCAGTCAAAGTTAATGAACTGGAAAGTCAAAGGAAACGGAAAGCTTCAAGGTGTAGTTGTAGTGCGAGATTGGTGGTTGCTAAAGAGACAATTGGATTGGAAGAAAAATGGGTGGTAATATATTTCAACAATGTCCACAACCATGATTTGTTAGATGAGAAAGAGGTTCAATTTCTCCCTGCTTATCGTAACATCCCGGTTGTTGACCAAAACCGTATACTAATGATGCATAAAGCTGGTTGTTCCATTAATGTCACAATGAGATTGCTTGAATTAGAGAAAGGAATAGATGTAGGTAGTCTACCATTTATGGATAAAGATATTAGGAATTTCCTTCAAAACCAAAATGGTATTGACAAACAAAATGATGCTTTAGATGTCTTGAAATTGTGTAAAGGGTTGAAAGAGTTAGATGATGCCTTCCAATATGATTACACAATAGATGAGAATAAGAAGTTGGAACACATTATTTGGGCATTTGGTGATTCAATCCGTGCATATGAATCTTTTGGGGATGTGGTTGTCTTTGATACTACTTATCGAATAAATCGTTATGATATGCCACTTGGAATATGGCTTGGAGTTGACAATCATGGGAATTCAGTTTTTTTTGGTTGTGTTCTATTACGAAATGAGAAGATTTCTTCGTTCACATGGGCTTTAAAGGTTGGTGTTGCTGTCCAGATTAGGAATCGAGTTGGAGAGGAAGCAAGAATGCGTCAAAAGTATCATAATCATCTGCTTAAAACAAGTTTTCCAATGGAGGAACATGTTGCATCTATACTCACACCTTATGCTTTTGGGTTGATTCAAATTGAGATTGAGTTATCTACAAAATATGCTGCAACTGAAACAAACAGTGGCTCTTTTATTGTGAAGCATCACACCAAAGATGATGGAGGTCGTCTTGTAACTTGGATAGAAAGTCAAGAATCAATTCGTTGCTCTTGTAAGGAATTTGAGTTTTCTGGAATATTGTGCAGGCATGCTATTCGAGTGCTTCTAATGAAAAATTATTTTCACATACCTTCAAAGTATCTTCCTTTTCGATGGAGACGTGAAAGTTCATTGATCCCAAAATCTAGTCACATAGTAAACAACAATGATGTCTCCTCTGCTGCGTTTCATTCTCTGATTCAATGTCTTGAATATGAATCTTTAAAAACAAAAGAACGGAAACAAATTGCTACTAAAGGGTTGGAGGATCTTATCCGAGAGATAAAAGGAATGTCCGAAAGTCATGAAGATCAAATTGGTTTGGAAGTTGTTCCAAATAATGATGAATGTGATGTTGGAATTCCAGTTAGAACTAGAAGCAAAGGTCGACCAAAAGGTTCAAAGGCAAAAGTAGTAGTTGAAGTTGTTTCAGATGATGATGAATGTGATGTTGGAAATCCAGTTAGAACCAAAAGCAAAGGTCGACCAAAACGATCAAGGCCAAAAGGAGGAGTTGAAGCTGCAACCAAGATTCGCCATTGTCTTTTTCCGAATTGTGGTGCAACCGGCCATGACACACGGAATTGTCCAAACAAAAGGAAACATAATGACATGTTGCCTAATGAATCACCTAATGTGTTCAAAAAGGGCTGGAGAAATTCATCTAATTAA | 1845 | 0.3669 | MSTEVRDEVDIDEIELLTNVDFPQIFDSDDDAYNFYSSFAQRSGFSIRRHHVYRNTTDEGNPETVYKREFVCHRSGVSKPVKVNELESQRKRKASRCSCSARLVVAKETIGLEEKWVVIYFNNVHNHDLLDEKEVQFLPAYRNIPVVDQNRILMMHKAGCSINVTMRLLELEKGIDVGSLPFMDKDIRNFLQNQNGIDKQNDALDVLKLCKGLKELDDAFQYDYTIDENKKLEHIIWAFGDSIRAYESFGDVVVFDTTYRINRYDMPLGIWLGVDNHGNSVFFGCVLLRNEKISSFTWALKVGVAVQIRNRVGEEARMRQKYHNHLLKTSFPMEEHVASILTPYAFGLIQIEIELSTKYAATETNSGSFIVKHHTKDDGGRLVTWIESQESIRCSCKEFEFSGILCRHAIRVLLMKNYFHIPSKYLPFRWRRESSLIPKSSHIVNNNDVSSAAFHSLIQCLEYESLKTKERKQIATKGLEDLIREIKGMSESHEDQIGLEVVPNNDECDVGIPVRTRSKGRPKGSKAKVVVEVVSDDDECDVGNPVRTKSKGRPKRSRPKGGVEAATKIRHCLFPNCGATGHDTRNCPNKRKHNDMLPNESPNVFKKGWRNSSN* | 615 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g0512 | 614 | Pfam | MULE transposase domain | 252 | 302 | IPR018289 | - | |
Tpr4g0512 | 614 | MobiDBLite | consensus disorder prediction | 590 | 614 | - | - | |
Tpr4g0512 | 614 | Pfam | FAR1 DNA-binding domain | 34 | 130 | IPR004330 | - | |
Tpr4g0512 | 614 | PANTHER | FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED | 24 | 302 | - | - | |
Tpr4g0512 | 614 | PANTHER | FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED | 307 | 492 | - | - | |
Tpr4g0512 | 614 | SMART | 26again6 | 392 | 419 | IPR006564 | GO:0008270 | |
Tpr4g0512 | 614 | ProSiteProfiles | Zinc finger SWIM-type profile. | 382 | 417 | IPR007527 | GO:0008270 | |
Tpr4g0512 | 614 | Pfam | SWIM zinc finger | 387 | 417 | IPR007527 | GO:0008270 | |
Tpr4g0512 | 614 | PANTHER | PROTEIN FAR1-RELATED SEQUENCE 10-RELATED | 307 | 492 | IPR031052 | GO:0006355 | |
Tpr4g0512 | 614 | PANTHER | PROTEIN FAR1-RELATED SEQUENCE 10-RELATED | 24 | 302 | IPR031052 | GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g0512 | Tpr-Chr4 | 4857935 | 4861179 | Transposed |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | FAR1 | Tpr4g0512 | FAR1 | 3.6e-19 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g0512 | - | - | lang:109341341 | 536.569 |