Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0512 ATGTCGACTGAAGTACGGGATGAAGTTGATATTGATGAAATTGAACTTCTTACAAATGTTGATTTCCCTCAAATATTTGATAGTGATGATGATGCTTATAATTTTTACTCTTCGTTTGCACAAAGAAGTGGTTTCTCAATTAGACGTCATCACGTTTATAGAAACACTACTGATGAGGGAAATCCAGAAACAGTTTACAAAAGAGAGTTCGTTTGCCATCGATCCGGGGTTTCTAAACCAGTCAAAGTTAATGAACTGGAAAGTCAAAGGAAACGGAAAGCTTCAAGGTGTAGTTGTAGTGCGAGATTGGTGGTTGCTAAAGAGACAATTGGATTGGAAGAAAAATGGGTGGTAATATATTTCAACAATGTCCACAACCATGATTTGTTAGATGAGAAAGAGGTTCAATTTCTCCCTGCTTATCGTAACATCCCGGTTGTTGACCAAAACCGTATACTAATGATGCATAAAGCTGGTTGTTCCATTAATGTCACAATGAGATTGCTTGAATTAGAGAAAGGAATAGATGTAGGTAGTCTACCATTTATGGATAAAGATATTAGGAATTTCCTTCAAAACCAAAATGGTATTGACAAACAAAATGATGCTTTAGATGTCTTGAAATTGTGTAAAGGGTTGAAAGAGTTAGATGATGCCTTCCAATATGATTACACAATAGATGAGAATAAGAAGTTGGAACACATTATTTGGGCATTTGGTGATTCAATCCGTGCATATGAATCTTTTGGGGATGTGGTTGTCTTTGATACTACTTATCGAATAAATCGTTATGATATGCCACTTGGAATATGGCTTGGAGTTGACAATCATGGGAATTCAGTTTTTTTTGGTTGTGTTCTATTACGAAATGAGAAGATTTCTTCGTTCACATGGGCTTTAAAGGTTGGTGTTGCTGTCCAGATTAGGAATCGAGTTGGAGAGGAAGCAAGAATGCGTCAAAAGTATCATAATCATCTGCTTAAAACAAGTTTTCCAATGGAGGAACATGTTGCATCTATACTCACACCTTATGCTTTTGGGTTGATTCAAATTGAGATTGAGTTATCTACAAAATATGCTGCAACTGAAACAAACAGTGGCTCTTTTATTGTGAAGCATCACACCAAAGATGATGGAGGTCGTCTTGTAACTTGGATAGAAAGTCAAGAATCAATTCGTTGCTCTTGTAAGGAATTTGAGTTTTCTGGAATATTGTGCAGGCATGCTATTCGAGTGCTTCTAATGAAAAATTATTTTCACATACCTTCAAAGTATCTTCCTTTTCGATGGAGACGTGAAAGTTCATTGATCCCAAAATCTAGTCACATAGTAAACAACAATGATGTCTCCTCTGCTGCGTTTCATTCTCTGATTCAATGTCTTGAATATGAATCTTTAAAAACAAAAGAACGGAAACAAATTGCTACTAAAGGGTTGGAGGATCTTATCCGAGAGATAAAAGGAATGTCCGAAAGTCATGAAGATCAAATTGGTTTGGAAGTTGTTCCAAATAATGATGAATGTGATGTTGGAATTCCAGTTAGAACTAGAAGCAAAGGTCGACCAAAAGGTTCAAAGGCAAAAGTAGTAGTTGAAGTTGTTTCAGATGATGATGAATGTGATGTTGGAAATCCAGTTAGAACCAAAAGCAAAGGTCGACCAAAACGATCAAGGCCAAAAGGAGGAGTTGAAGCTGCAACCAAGATTCGCCATTGTCTTTTTCCGAATTGTGGTGCAACCGGCCATGACACACGGAATTGTCCAAACAAAAGGAAACATAATGACATGTTGCCTAATGAATCACCTAATGTGTTCAAAAAGGGCTGGAGAAATTCATCTAATTAA 1845 0.3669 MSTEVRDEVDIDEIELLTNVDFPQIFDSDDDAYNFYSSFAQRSGFSIRRHHVYRNTTDEGNPETVYKREFVCHRSGVSKPVKVNELESQRKRKASRCSCSARLVVAKETIGLEEKWVVIYFNNVHNHDLLDEKEVQFLPAYRNIPVVDQNRILMMHKAGCSINVTMRLLELEKGIDVGSLPFMDKDIRNFLQNQNGIDKQNDALDVLKLCKGLKELDDAFQYDYTIDENKKLEHIIWAFGDSIRAYESFGDVVVFDTTYRINRYDMPLGIWLGVDNHGNSVFFGCVLLRNEKISSFTWALKVGVAVQIRNRVGEEARMRQKYHNHLLKTSFPMEEHVASILTPYAFGLIQIEIELSTKYAATETNSGSFIVKHHTKDDGGRLVTWIESQESIRCSCKEFEFSGILCRHAIRVLLMKNYFHIPSKYLPFRWRRESSLIPKSSHIVNNNDVSSAAFHSLIQCLEYESLKTKERKQIATKGLEDLIREIKGMSESHEDQIGLEVVPNNDECDVGIPVRTRSKGRPKGSKAKVVVEVVSDDDECDVGNPVRTKSKGRPKRSRPKGGVEAATKIRHCLFPNCGATGHDTRNCPNKRKHNDMLPNESPNVFKKGWRNSSN* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0512 614 Pfam MULE transposase domain 252 302 IPR018289 -
Tpr4g0512 614 MobiDBLite consensus disorder prediction 590 614 - -
Tpr4g0512 614 Pfam FAR1 DNA-binding domain 34 130 IPR004330 -
Tpr4g0512 614 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 24 302 - -
Tpr4g0512 614 PANTHER FAR1 DNA BINDING DOMAIN, ZINC FINGER, SWIM-TYPE, MULE TRANSPOSASE DOMAIN, FHY3/FAR1 FAMILY-RELATED 307 492 - -
Tpr4g0512 614 SMART 26again6 392 419 IPR006564 GO:0008270
Tpr4g0512 614 ProSiteProfiles Zinc finger SWIM-type profile. 382 417 IPR007527 GO:0008270
Tpr4g0512 614 Pfam SWIM zinc finger 387 417 IPR007527 GO:0008270
Tpr4g0512 614 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 307 492 IPR031052 GO:0006355
Tpr4g0512 614 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 24 302 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0512 Tpr-Chr4 4857935 4861179 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr4g0512 FAR1 3.6e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0512 - - lang:109341341 536.569