Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0497 ATGGAGGAGTCTGGAGAAAATTGGCCTTTTGAGTCTGATTTGGTAATTGGTGATGATGTAATTTTTGAAGATGGAGATCAATCTGAATCTGTGTGTGGTGATAGAGAGATTAAGGAGAAATTGATGGCACTTTCAGCCACCATAGGCTTAAACAAGATGGACGACACTACAATCCTAGACAAAGCTAAAGACTATGTGGAAAACCTTCAAGAACGTGTGAAAGAGCTAGAACAAGAAAGTGGATCCAACATCAACATGTGTAACAACAAAAGGACACAAAATGTGAACTCAAATGAATACAGTTGTGGAACAGATGACAATCTTCCCGTGGTCCAAGCAAAAGTGTTACAAAGGGAAGTTCTTGTCATGATCCATTGTGAGAAACAAAATGGTGTCATACTCAAAATATTGACCCACCTTGAAAATCTTCATCTTTCAGTAGTTAATAGTAGTGTCCTGCAATTTGGAAAATCCAACCTTAACATCACCATTGTTGCGCAGATGGGTGATGGATACAAGATTACAGTGGATGAATTAGTGAAAACCCTAAGATTAGTGATCTCAACACAATAG 573 0.3822 MEESGENWPFESDLVIGDDVIFEDGDQSESVCGDREIKEKLMALSATIGLNKMDDTTILDKAKDYVENLQERVKELEQESGSNINMCNNKRTQNVNSNEYSCGTDDNLPVVQAKVLQREVLVMIHCEKQNGVILKILTHLENLHLSVVNSSVLQFGKSNLNITIVAQMGDGYKITVDELVKTLRLVISTQ* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0497 190 PANTHER BHLH TRANSCRIPTION FACTOR 35 189 - -
Tpr4g0497 190 Gene3D - 35 84 IPR036638 GO:0046983
Tpr4g0497 190 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 36 83 IPR036638 GO:0046983
Tpr4g0497 190 Coils Coil 59 86 - -
Tpr4g0497 190 PANTHER PROTEIN, PUTATIVE-RELATED 35 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0497 Tpr-Chr4 4694437 4700225 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0497 29 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 34.921 3.65e-25 97.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0497 - - aip:107616596 197.593