Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0483 ATGGCAACAAATGGGGGTGCTAATAAGAAGGTTTGTGTAACTGGGGCTGGAGGGTTTGTAGCATCATGGCTTGTTAAGCTTCTTCTTTCCAAAGGTTATTCTGTCCATGGAACTGTTAGACAACTTGGTAGTAAGAAATATGAACACTTGCTGAAACTTGAGAGAGCTTCTGAGAACCTTACACTTTTCGAAGCAGATATCTTGAATTATGAATCTGTTTACAAGGCAATTGTCGGATGCAGTGCCGTTTTCCATGTTGCTAGCCCTGTACCTTCAACAGTTGTACCAAATCCTGAGGTGGAAGTGATTGAGCCTGCAGTGAAGGGAACTGCTAATGTACTTGAAGCTTGTCTCAAAGCTAAAGTGGAACGCGTTGTCTTTCTATCATCTGCAGCTGCTGTTGCTATCAATCCTAATTTCCCCAAAGAGAAAGTGATCGATGAATCTTGTTGGTCTGATAAAGACTACTGCAAAAATACTAAGAACTGGTATTATTATTCCAAGACAGAAGCAGAAGAGCAGGCCCTGAATTTCGCGAAAAGAACTGGACTTAATGTTGTAAGCATTTGTCCTCCCCTTGTTTTGGGGCCAATTTTACAGTCAACCACTAATTTAAGTAGCTTGGTTCTCATCAAACTTTTAAAAGGCTGTGATTCATTGAAGTATCAACATCGTTGGATAGTTGACGTGCGAGATGTAGTTGATGCAATACTTTTGGCTTATGAGAATCACAAGGCAGAAGGGAGATACATATGTTTTTCACACACTGTCGCAAATCGAGATTTGTTGGAGAAATTGAAGAGTCTATTTCCAAACTACAAGTACCCTACAAACTATACTGAGGTGGATGATTATAGAATGCTGACTCTGAGCTCACAGAAACTGCAAAATTTGGGTTGGAAATTCAGGCCTTTGGAGGAAACACTCATTGATTCTGTTAAGAGCTATAAGGAAGCTGGACTACTTTAA 969 0.4025 MATNGGANKKVCVTGAGGFVASWLVKLLLSKGYSVHGTVRQLGSKKYEHLLKLERASENLTLFEADILNYESVYKAIVGCSAVFHVASPVPSTVVPNPEVEVIEPAVKGTANVLEACLKAKVERVVFLSSAAAVAINPNFPKEKVIDESCWSDKDYCKNTKNWYYYSKTEAEEQALNFAKRTGLNVVSICPPLVLGPILQSTTNLSSLVLIKLLKGCDSLKYQHRWIVDVRDVVDAILLAYENHKAEGRYICFSHTVANRDLLEKLKSLFPNYKYPTNYTEVDDYRMLTLSSQKLQNLGWKFRPLEETLIDSVKSYKEAGLL* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0483 322 Gene3D - 2 322 - -
Tpr4g0483 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 321 - -
Tpr4g0483 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 317 IPR036291 -
Tpr4g0483 322 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 321 - -
Tpr4g0483 322 CDD FR_SDR_e 11 300 - -
Tpr4g0483 322 Pfam NAD dependent epimerase/dehydratase family 11 246 IPR001509 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0483 Tpr-Chr4 4593498 4596024 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0483 10 322 Monolignol Biosynthesis Gene Families AT2G33590 58.413 7.99e-130 371
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0483 - - mtr:MTR_4g009040 529.635