Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0482 ATGGCAACAAATGGGGGTGCTAATAAGAAGGTTTGTGTAACTGGGGCTGGAGGGTTTATAGCATCATGGCTTGTTAAGCTTCTTCTATCCAAAGGTTACTCTGTCCATGGAACTGTCAGACAACCTGGTAGTAAGAAATATGAACACTTACTGAAACTTGAGAGAGCTTCAGAGAACCTTACACTTTTCGAAGCAGATATCTTGAATTATGAATCTCTTTACAAAGCAATTGTCAGATGCAGTGCAGTTTTCCATGTTGCTAGTCCTGTACCTTCAACAGTTGTATCAAATCCTGAGGTGGAAGTGATTGAGCCTGCAGTGAAAGGAACTGCTAATGTACTTGAAGCTTCTCTCAAAGCTAAAGTGGAACGTGTCGTCTTTGTATCATCTGGAGTTGCTGCTGCTATCAATCCTAATTTCCCGAAAGATAAAGTGATTGACGAGTCTTGTTGGTCTGATAAAGACTACTGCAAAAAAGCTAAGAACTGGTATTGTTATGCCAAGACAGAAGCAGAAGAGCAGGCGCTGAATTTCGCGAAAAGAACCGGGCTTGATGTTGTAAGCATTTGTCCTACCCTTGTTTTGGGACCAATTTTACAGTCAACCACTAATTCAAGTAGTTTGGTTCTCATCAAACTTTTAAAAGGCTGTGATACATTGGAGAACAAGCATCGTTGGATAGTTGACGTACGAGATGTAGTTGATGCGATACTTTTGGTTTATGAGAATCACAAGGCAGAAGGGAGATACATATGTTTTTCACACGCTGTCACGGAACGAGATTTGGTGGAGAAATTGAAGAGTATATTTCCAAATTACAAGTGCCCTACAAACTATAGTGAGGTGGATGATAACAGAATGCTGAGCTCAGAGAAACTGCAAAGTTTAGGTTGGAAATTCAGGCCATTGGAGGAAACACTCATTGATTCTGTTAAGAGCTATGAGGAGGCTGGACTACTCTAA 963 0.4081 MATNGGANKKVCVTGAGGFIASWLVKLLLSKGYSVHGTVRQPGSKKYEHLLKLERASENLTLFEADILNYESLYKAIVRCSAVFHVASPVPSTVVSNPEVEVIEPAVKGTANVLEASLKAKVERVVFVSSGVAAAINPNFPKDKVIDESCWSDKDYCKKAKNWYCYAKTEAEEQALNFAKRTGLDVVSICPTLVLGPILQSTTNSSSLVLIKLLKGCDTLENKHRWIVDVRDVVDAILLVYENHKAEGRYICFSHAVTERDLVEKLKSIFPNYKCPTNYSEVDDNRMLSSEKLQSLGWKFRPLEETLIDSVKSYEEAGLL* 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0482 320 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 315 IPR036291 -
Tpr4g0482 320 CDD FR_SDR_e 11 298 - -
Tpr4g0482 320 Gene3D - 2 320 - -
Tpr4g0482 320 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 319 - -
Tpr4g0482 320 Pfam NAD dependent epimerase/dehydratase family 11 246 IPR001509 -
Tpr4g0482 320 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0482 Tpr-Chr4 4589307 4592140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0482 10 320 Monolignol Biosynthesis Gene Families AT2G33590 60.383 1.01e-133 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0482 - - mtr:MTR_4g009040 530.02