Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0481 ATGGCAATAAACGGGGGTGCTAATAAGAAGGTTTGTGTAACTGGGGCTGGAGGGTTTGTAGCATCATGGCTTGTTAAGCTTCTTCTTTCCAAAGGTTACTCTGTCCATGGAACTGTCAGACAACCTGGTAGTAAGAAATATGAACACTTGCTTAAACTTGAGAGAGCTTCTGAGAACCTTACACTTTTCGAAGCAGATATCTTGAATTATGAATCTGTTTACAAAGCAATTGTCGGATGCACTGCTGTTTTCCATGTTGCAAGCCCTGTACCTTCAACAGTTGTACCAAATCCTGAGGTGGAAGTGATTGAGCCAGCAGTGAAGGGAACTGCTAATGTACTTGAAGCTTCTCTCAAAGCTAAAGTGGAGCGTGTCGTCTTTGTATCATCTGGAGCTGCTGTTGCTATCAATCCTAATTTCTCGGAAGATAAAGTGATTGACGAGTCTTGTTGGTCTGACAAAGACTACTGCAAAAAAACTAAGAACTGGTATTGTTATGCCAAGACAGAAGCAGAAGAGCAGGCACTGAATTTCGCGAAAAGAACTGGGCATGATGTTGTAAGCATTTGTCCTACCCTTGTTTTGGGGCCAATTTTACAGTCAACCACTAACTCAAGTAGCTTAGTTCTCATCAAACTTTTAAAAGGTTGTGATACATTGGAGAATAAGCACCGTTGGATAGTTGACGTACGAGACTTGGTCGATGCAATACTATTGGCATATGAGAATCATGAGGCAGAAGGGAGATACATATGCACTTCACACGCTGTCACGGAACGAGATTTGGTGGAGAAATTGAAGAGTAAATATCCAAACTACAAGTACCCTACAAACTATACTGAGGTGAATGATTACAGAATGCTGAGCTCAAAGAAACTGCAAAGTTTAGGATGGAAATTCAGGCCATTGGAGGAAACACTAATTGATTCTGTTAAGAGCTATGAGGAGGCTGGAATACTTCATTCACAATAA 972 0.4115 MAINGGANKKVCVTGAGGFVASWLVKLLLSKGYSVHGTVRQPGSKKYEHLLKLERASENLTLFEADILNYESVYKAIVGCTAVFHVASPVPSTVVPNPEVEVIEPAVKGTANVLEASLKAKVERVVFVSSGAAVAINPNFSEDKVIDESCWSDKDYCKKTKNWYCYAKTEAEEQALNFAKRTGHDVVSICPTLVLGPILQSTTNSSSLVLIKLLKGCDTLENKHRWIVDVRDLVDAILLAYENHEAEGRYICTSHAVTERDLVEKLKSKYPNYKYPTNYTEVNDYRMLSSKKLQSLGWKFRPLEETLIDSVKSYEEAGILHSQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0481 323 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 320 - -
Tpr4g0481 323 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 315 IPR036291 -
Tpr4g0481 323 CDD FR_SDR_e 11 298 - -
Tpr4g0481 323 Pfam NAD dependent epimerase/dehydratase family 11 246 IPR001509 -
Tpr4g0481 323 Gene3D - 2 323 - -
Tpr4g0481 323 PANTHER NAD(P)-BINDING ROSSMANN-FOLD SUPERFAMILY PROTEIN 9 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0481 Tpr-Chr4 4584027 4587705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0481 10 320 Monolignol Biosynthesis Gene Families AT2G33590 60.383 8.99e-136 386
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0481 - - mtr:MTR_4g009040 535.028