Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0468 ATGGAAAGCAAAGACAACATTGAAGCTGTTAGAAAGTTCTTAAATTCTAGCTTAGAAACATCAAAAACTATTTCTTCTGCATTAGATGAATCTGGTTCAAGATTGAAGCTACTTAACCAAAGATTTTTATCCATGCAAGCTTCTCTTAGACCAATCTCAATGCAAAACCTTCCTTTTTCTGATGTTGAACATGGTTTAGACAGTGTTCTATGTTCTGTTTCAGCAGTCCACAAAGTTTTTCAATGTGTTAACCAATTGGAACATTCTCTTTCGGCAGACGCGAGTTCCGATTTATTCACATATGTCTCGAACACAAAGAAGCTTGAAGAGGCATTGAAGCTTCTCACTGATAATTGTAAGTTAGCAACTAGTTGGTTGAAGAGTGTTTTTGAGTTCTTACAAAACAAAACAACAATTAGTACTAATGAGGTTTACCTATTGAATATAAAGAAATCCTTCAGAATATTGCAAGAATTGCAGGCCATAGAGGACGATGCACGATTGGAAGGAGGAATTCTCAGTATTGCCCTTGACAAACTAGAGATTGCTTTTCACAAACTTCTAATGGAAAATTCTATGCCTCTTCCTTTGGTTTCATTGACATCACAAATTGATCAGCAAAACAATGTCACAGAACAAGGTTTGAAATTTCCAAGTTCTTTAACAGCGAAACTTCAGGTCATTGCCGAGAGATTAAATGCTAATAACAGGCTAGACAAGTGTCAAACTATGTATGTTGAAGTTCGAGGTACAAATGCTCGCCGAAGTTTGAAGACTTTGGATTTGAGCTACCTTGAGACTTCAACATCCGAGTTTGAGGTTTCACATGGAATGGAAAATTGCATAGATCAATGGGGAAATCATTTGGAGTTGGTTGTTAAGAAACTTCTTGAGGTTGAATACACGCTATGTACTAATGTATTCGAGAAAACTGGTTCAAAAGCATGGATAAGTTGTTTTGCAAAGATTGCTATTGAATCAAGAATCTTTTCATTTATCAAATTTGGAAAGGTTGTTACTGAGAAGAAAAATGATCCTTTCAAGCTATTGAATTTGTTGTCAATGTTTAAGGTTTTGAATGGTTTAAGACTAAAATTTAATCAACTTTTTAGAGGAGAAGCTTGTGAAGAAATTAGAATTGTTACAAAGGATCTTATCACAAAAGTTGTGAATGGTGCTAGTGAGATATTCTTGCAACTTTCAGAACAAGTGAAGTTGCAAAGACCAACTTGTCCTCCCTCAGATGGTACTGTTCCTAAGCTGGTAAGTTTTGTTACTGATTATTGTAATAAGCTTCTTAGTGATGAGTATAAGCCACATTTAAATAAGGTTTTGGAAATATATCTTAGTTGGAAAAATGAACTATATGAAGAGGGTATTTTTGTAACTCAAATATATAGCATAATTAGGGAAGTTGCAGTAAATTTAGACAATTGGTCAAAAGCATATGAAGATATCAATATGTCATATTTTTTTATGATGAATAATCATTGTCATTTCTACAATTTAAAGGGTACTTTAGTTGGGATTATGATGGGAGATTCTTGGTTAAAAGCACATGACCAATATAAAGAATATTATGCAACACTTTATTTGAAGAATACTTGGGTAAATCTTCAAAATATTCTTGTAGTTTCATCTTCTATGACTTGTCAAGATTTAGCTAAGAGAATAAATGCTTTTATTCTAGCTTTTGATGAAAGGTACAAGAAACAATGTAATTTGATAATCTATGATGAGATATTGAGGGAAAGTGTGTGTAAACATTTGGTGGAAGGTATTATACCAATTTATAAGGTATACTTGAAGAATTATATTTTGGCACTTGAAAGTGATGATGCTATGGTTGACAATAAGAGTATTAAATATACATCACAAAGTTTGGAAAATAGGATTTGGTCATTGTTTCAACCAAAGTTGAGAAAGCATGGTGATAGCATTAAACACAAAGATTTGATTAGTAAAATAAAAGAAGTGAGTCATCAATTTCGTTTGACTTTAGTTGGTTTATAG 2013 0.3284 MESKDNIEAVRKFLNSSLETSKTISSALDESGSRLKLLNQRFLSMQASLRPISMQNLPFSDVEHGLDSVLCSVSAVHKVFQCVNQLEHSLSADASSDLFTYVSNTKKLEEALKLLTDNCKLATSWLKSVFEFLQNKTTISTNEVYLLNIKKSFRILQELQAIEDDARLEGGILSIALDKLEIAFHKLLMENSMPLPLVSLTSQIDQQNNVTEQGLKFPSSLTAKLQVIAERLNANNRLDKCQTMYVEVRGTNARRSLKTLDLSYLETSTSEFEVSHGMENCIDQWGNHLELVVKKLLEVEYTLCTNVFEKTGSKAWISCFAKIAIESRIFSFIKFGKVVTEKKNDPFKLLNLLSMFKVLNGLRLKFNQLFRGEACEEIRIVTKDLITKVVNGASEIFLQLSEQVKLQRPTCPPSDGTVPKLVSFVTDYCNKLLSDEYKPHLNKVLEIYLSWKNELYEEGIFVTQIYSIIREVAVNLDNWSKAYEDINMSYFFMMNNHCHFYNLKGTLVGIMMGDSWLKAHDQYKEYYATLYLKNTWVNLQNILVVSSSMTCQDLAKRINAFILAFDERYKKQCNLIIYDEILRESVCKHLVEGIIPIYKVYLKNYILALESDDAMVDNKSIKYTSQSLENRIWSLFQPKLRKHGDSIKHKDLISKIKEVSHQFRLTLVGL* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0468 670 Pfam Exo70 exocyst complex subunit 284 632 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr4g0468 670 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 3 659 - -
Tpr4g0468 670 SUPERFAMILY Cullin repeat-like 76 636 IPR016159 -
Tpr4g0468 670 PANTHER EXOCYST COMPLEX PROTEIN EXO70 3 659 IPR004140 GO:0000145|GO:0006887
Tpr4g0468 670 Gene3D Exocyst complex component Exo70 130 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0468 Tpr-Chr4 4488412 4490424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0468 9 644 EXO70 exocyst subunit family AT4G31540 45.789 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0468 K07195 - gmx:121175138 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0468 4 4488412 4490424 Tpr4g0468 4 4488412 4490424 ECH