Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0465 ATGACTACCTCCAACGGCCACCACACCGTTACTATCTCCGCCGCTCATGACAACAACGATGACGACGAAAATCTCCCTCCTTCCAATAACAACCGCCGTGATGATGATAATGGTGATGGCGACAACGGCGATGAACAAATCGATCCTGATGATCCTTTCGATATTACTCAAACTAAGAATGCTTCTCATGAGACTCTTCGCCGTTGGAGACAAGCAGCACTGGTGCTCAATGCGTCCAGGCGATTTAGATATACTCTGGATTTAAAAGGTGAAGAGGAAAAACAGCAAAAGAAGAGCTTAATTAGAGCACATGCACAAGTCATAAGAGCTGCACTTCTTTTCAGATTGGCCGGCGAACGCGAGCTAGTGATAAGTCCAGAAGCTACACCCCCACCTCAAACTTCAGTCGGTGACTATGGGGTTGAGCTAGAACAACTTGCTTCGATGTCTAAGGATCAGAATATTTCTGCTTTACAGCAATATGGTGGGGTTAAAGGCCTATCAAATTTACTAAAATCAAATCCAGATAAAGGAATTAGTGGAGATGATGCTGATCTATTGAAAAGGAAAAATGCATTTGGAACTAATACATATCCTCGAAAAAAAGGGAGAAGTTTCTGGAGGTTTTTATGGGAAGCTTGGCAAGATCTGACTCTCATAATATTGATTATAGCAGCTGCAGTGTCATTGGTACTTGGAATAAAAACAGAGGGTTTGAGTGAAGGATGGTATGATGGAGGAAGCATTGCTTTTGCAGTTTTACTTGTTATTGTAGTAACAGCTGTCAGTGATTATCGACAATCTCTGCAATTTCAGAATTTGAATGCAGAGAAACAAAATATACAATTGGAGGTCATTAGAGGTGGGAGAACAATTAAAATATCAATATTTGATATTGTTGTTGGTGATGTTATACCCCTTAAAATAGGAGATCAGGTTCCTGCTGATGGAGTAGTAATCACAAGCCACTCACTTGCAATTGATGAATCCAGTATGACGGGTGAAAGCAAGATTGTTCATAAGGATCACAAAGCACCCTTTTTTATGTCTGGTTGCAAAGTAGCAGATGGAGTTGGCGTTATGCTGGTAACTGGTGTTGGTATTAATACTGAGTGGGGATTGTTGATGGCAAGTATCTCAGAGGACACCGGAGAAGAGACTCCATTACAGGTACGTTTGAATGGAGTGGCAACTTTTATAGGTATAGTTGGGCTTACTGTTGCTGTTTCAGTGCTTGCAGTCCTCTTGGGCAGATACTTTTCTGGCCACACAAATGATTTAAATGGAAATCCTGAATTTGTTGCCGGAAGGACTAGCATTAGTGATGCAGTTGATGGGGTCATCAAAATTTTTACGATTGCAGTCACAATTGTAGTTGTTGCAGTGCCTGAGGGTCTACCTTTGGCTGTTACTTTAACCCTGGCATACTCAATGCGGAAAATGATGGCAGATAAAGCCTTGGTACGAAGGCTGTCAGCCTGCGAAACTATGGGCTCTGCTACAACAATTTGCAGTGATAAGACAGGAACATTGACGTTAAATCAGATGACTGTTGTTGAGGCATATGCTGGGAGGAACAAGCTAAATCCACCAGATGACTCTTCACTGTTGCATCCAGAAGCATTATCTCTGATAAATGAAAGCATTGCACAGAATTCAACCGGAAATGTTTTTTTGTCGAAGGATGGTGGAGAGGTAGAGGTGTCAGGATCACCGACGGAGAAGGCCATTCTGTCATGGGCAGTCAAGTTGGGTATGAATTTTGATCTTATCAGATCTAATTCAACAGTTCTTCACGTCTTTCCATTCAATTCTGAGAAAAAAAGAGGTGGTGTTGCTCTGAAGCTGGTGGACTCTGGAGTGCATATACACTGGAAAGGAGCTGCAGAAATAGTTCTAGGAGCATGTACCCAATATCTTGATTCAAACGGTCACTTGCAATCCCTTGAAGAAGAGAAGAATTTTTTCAAGGAGGCTATTGATGACATGGCTGCTCGCAGCTTGCGTTGTGTTGCCATTGCATACAGATCATATGATTTAGAAAAAGTTCCATCTAATGAGCAGGATTTAGACCAATGGTCCTTACCAGAAGATGAGCTTATTTTACTTGCTATTGTTGGAATCAAGGATCCTTGTCGCCCTAGTGTCAAAGATGCTGTGAGAGTATGCACTGACGCTGGTGTTAAGGTACGCATGGTTACTGGGGACAACCTTCAAACAGCAAAGGCAATAGCTCTGGAGTGTGGGATACTGGCTTCAATTGAAGATGCTGTTGAGCCAAATATAATTGAAGGAAAGGTATTCCGGGAGCTATCTGAAAAAGAAAGGGAACAGGTTGCCAAGAAAATCACGGTGATGGGCAGGTCATCTCCTAACGACAAGCTTTTGCTTGTGCAAGCACTACGTAAAGGAGGTGAAGTGGTTGCTGTCACAGGAGATGGCACCAATGATGCCCCTGCACTACACGAGGCAGATATTGGTCTTTCTATGGGCATCCAAGGAACTGAAGTTGCAAAAGAAAGCTCAGATATTATAATCTTGGATGATAACTTTGCATCAGTTGTAAAGGTTGTCCGCTGGGGCCGCTCTGTATATGCTAATATTCAGAAATTTATCCAGTTCCAGCTTACTGTCAATGTTGCTGCGCTTGTAATAAATGTTGTGGCAGCAATAAGTTCTGGTGATGTTCCTTTAAATGCAGTACAGCTTTTGTGGGTCAACCTTATCATGGACACACTTGGGGCCCTTGCACTGGCTACCGAACCACCAACAGACCACCTAATGCACAGATCACCTGTTGGTCGAAGGGAACCACTTATAACAAATATCATGTGGAGAAACTTGATCGTACAGGCTCTTTATCAAGTTGTAGTTCTTCTTGTTCTGAACTTCGCCGGCGAAAGTATTCTACCTAAGCAAGATACTAGAGCCCATGACTTTCAAGTGAAGAATACTTTGATATTCAATGCATTCGTCATGTGCCAAATATTCAATGAGTTCAATGCTCGGAAACCAGATGAAATGAATGTCTTCCGAGGAGTGACTAAGAACCGTCTCTTCATGGGAATTGTTGGAGTAACCTTTATACTTCAGATAATCATCATCGAGTTCCTTGGAAAATTCGCCTCAACAGTGAGACTTGACTGGAAGCTGTGGCTTGCTTCTTTTTTAATTGGTATTGTCAGCTGGCCTCTTGCTATAGCTGGAAAATTAATTCCAGTTCCCAAAACACCGTTGTCGCGTTACTTCTTAAGGCCACTCAGGCGGTTGAGGAGGTCTCGTTCAGCACAATAG 3294 0.4256 MTTSNGHHTVTISAAHDNNDDDENLPPSNNNRRDDDNGDGDNGDEQIDPDDPFDITQTKNASHETLRRWRQAALVLNASRRFRYTLDLKGEEEKQQKKSLIRAHAQVIRAALLFRLAGERELVISPEATPPPQTSVGDYGVELEQLASMSKDQNISALQQYGGVKGLSNLLKSNPDKGISGDDADLLKRKNAFGTNTYPRKKGRSFWRFLWEAWQDLTLIILIIAAAVSLVLGIKTEGLSEGWYDGGSIAFAVLLVIVVTAVSDYRQSLQFQNLNAEKQNIQLEVIRGGRTIKISIFDIVVGDVIPLKIGDQVPADGVVITSHSLAIDESSMTGESKIVHKDHKAPFFMSGCKVADGVGVMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAVSVLAVLLGRYFSGHTNDLNGNPEFVAGRTSISDAVDGVIKIFTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTLNQMTVVEAYAGRNKLNPPDDSSLLHPEALSLINESIAQNSTGNVFLSKDGGEVEVSGSPTEKAILSWAVKLGMNFDLIRSNSTVLHVFPFNSEKKRGGVALKLVDSGVHIHWKGAAEIVLGACTQYLDSNGHLQSLEEEKNFFKEAIDDMAARSLRCVAIAYRSYDLEKVPSNEQDLDQWSLPEDELILLAIVGIKDPCRPSVKDAVRVCTDAGVKVRMVTGDNLQTAKAIALECGILASIEDAVEPNIIEGKVFRELSEKEREQVAKKITVMGRSSPNDKLLLVQALRKGGEVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMHRSPVGRREPLITNIMWRNLIVQALYQVVVLLVLNFAGESILPKQDTRAHDFQVKNTLIFNAFVMCQIFNEFNARKPDEMNVFRGVTKNRLFMGIVGVTFILQIIIIEFLGKFASTVRLDWKLWLASFLIGIVSWPLAIAGKLIPVPKTPLSRYFLRPLRRLRRSRSAQ* 1098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0465 1097 Gene3D - 501 856 IPR023214 -
Tpr4g0465 1097 Gene3D - 514 711 IPR023299 GO:0000166
Tpr4g0465 1097 Pfam Cation transporter/ATPase, N-terminus 162 229 IPR004014 -
Tpr4g0465 1097 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 777 891 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr4g0465 1097 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 442 537 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Tpr4g0465 1097 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 511 708 IPR023299 GO:0000166
Tpr4g0465 1097 SUPERFAMILY Calcium ATPase, transduction domain A 282 377 IPR008250 -
Tpr4g0465 1097 SUPERFAMILY HAD-like 502 916 IPR036412 -
Tpr4g0465 1097 SUPERFAMILY Calcium ATPase, transmembrane domain M 161 1074 IPR023298 -
Tpr4g0465 1097 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 148 1074 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Tpr4g0465 1097 PRINTS P-type cation-transporting ATPase superfamily signature 328 342 - -
Tpr4g0465 1097 PRINTS P-type cation-transporting ATPase superfamily signature 504 518 - -
Tpr4g0465 1097 PRINTS P-type cation-transporting ATPase superfamily signature 704 715 - -
Tpr4g0465 1097 PRINTS P-type cation-transporting ATPase superfamily signature 726 736 - -
Tpr4g0465 1097 PRINTS P-type cation-transporting ATPase superfamily signature 811 830 - -
Tpr4g0465 1097 PRINTS P-type cation-transporting ATPase superfamily signature 835 847 - -
Tpr4g0465 1097 Gene3D - 185 380 - -
Tpr4g0465 1097 CDD P-type_ATPase_Ca_PMCA-like 186 944 - -
Tpr4g0465 1097 ProSitePatterns E1-E2 ATPases phosphorylation site. 506 512 IPR018303 -
Tpr4g0465 1097 Gene3D - 61 115 - -
Tpr4g0465 1097 SFLD Haloacid Dehalogenase 486 863 - -
Tpr4g0465 1097 PANTHER CATION TRANSPORTING ATPASE 44 1089 - -
Tpr4g0465 1097 Pfam haloacid dehalogenase-like hydrolase 501 825 - -
Tpr4g0465 1097 Pfam Ca2+-ATPase N terminal autoinhibitory domain 50 92 IPR024750 GO:0005516
Tpr4g0465 1097 Gene3D - 212 1061 - -
Tpr4g0465 1097 MobiDBLite consensus disorder prediction 14 39 - -
Tpr4g0465 1097 SFLD p-type atpase 486 863 IPR044492 -
Tpr4g0465 1097 PANTHER CALCIUM-TRANSPORTING ATPASE 44 1089 - -
Tpr4g0465 1097 Coils Coil 646 666 - -
Tpr4g0465 1097 PRINTS Sodium/potassium-transporting ATPase signature 247 267 - -
Tpr4g0465 1097 PRINTS Sodium/potassium-transporting ATPase signature 497 518 - -
Tpr4g0465 1097 PRINTS Sodium/potassium-transporting ATPase signature 623 641 - -
Tpr4g0465 1097 Pfam Cation transporting ATPase, C-terminus 896 1071 IPR006068 -
Tpr4g0465 1097 MobiDBLite consensus disorder prediction 1 64 - -
Tpr4g0465 1097 SMART Cation_ATPase_N_a_2 160 234 IPR004014 -
Tpr4g0465 1097 Pfam E1-E2 ATPase 281 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0465 Tpr-Chr4 4448627 4466691 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0465 2 1096 Primary Pumps ATPases AT3G21180 76.460 0.0 1680
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0465 K01537 - gmx:100777143 1820.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0465 4 4448627 4466691 Tpr4g0465 4 4448627 4466691 ECH