Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0447 ATGGCCAAGAAATCTCAAAAATCTCACAAAACCACTTCTTCTAATTCTTCTTCCACCACCACCATGGTTAAACGTAAACGTAAAAGCATCCAAAGAACTTCACCTCCACAAAGAAGCTCAATTTATAGGGGTGTTACAAGACATCGTTGGACTGGTCGATATGAAGCTCATTTGTGGGATAAGAATTGTTGGAATGAATCACAGAGCAAAAAAGGAAGACAAGTATATCTAGGGGCATATGATGATGAAGAAGCTGCAGCACGTGCCTATGACTTGGCAGCATTGAAGTACTGGGGACAAGAAACAATTCTCAATTTTCAAGTATCAAACTATCAAGAGGAGCTCAAAGAGATGGAAGGACAATCAAAAGAAGAATATATTGGATCCTTAAGAAGAAAAAGTAGTGGATTTTCTAGAGGAGTCTCAAAATACAGAGGTGTAGCAAGACACCACCACAATGGAAGATGGGAAGCTCGAATTGGCAGGGTCTTCGGCAACAAATATTTATATCTTGGAACCTATGCTACACAAGAAGAAGCAGCCACAGCATATGACGTGGCAGCAATACAGTACAGAGGACTTAACGCCGTTACAAACTTTGATCTTAGCCGTTATAGCAATTGGTTAGGTCCTAAAACTCAAGACAACAATGATAATAACAACCACAATAATCAAAATTCTAGCAATAATCAAGAGCTGGATCTTAATCAAGAACTTGATGTCAGTGCCACATCAGCATCTTCGACATTTGGTCATATCTTAAAATCATCAAAATTCACAGAAATGATAGAAAAAACATTACCAGACGAAATTGAAGATAGTTACACTCCACCATCTTCAGAGTCAACTCCTCCACGTCGTACATTTCCTGAAGATATTCAAACAATTTTTGAAACACAAGATTCAAGTATCTACACAGAAAATGATGATGACATTATATTTGGTGAGTTGAGCTCATTTGCTGCCCCAATTTTTCATTATGGACTTGATGTTTGA 996 0.3795 MAKKSQKSHKTTSSNSSSTTTMVKRKRKSIQRTSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQSKKGRQVYLGAYDDEEAAARAYDLAALKYWGQETILNFQVSNYQEELKEMEGQSKEEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDVAAIQYRGLNAVTNFDLSRYSNWLGPKTQDNNDNNNHNNQNSSNNQELDLNQELDVSATSASSTFGHILKSSKFTEMIEKTLPDEIEDSYTPPSSESTPPRRTFPEDIQTIFETQDSSIYTENDDDIIFGELSSFAAPIFHYGLDV* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0447 331 MobiDBLite consensus disorder prediction 268 288 - -
Tpr4g0447 331 CDD AP2 142 203 IPR001471 GO:0003700|GO:0006355
Tpr4g0447 331 Pfam AP2 domain 41 99 IPR001471 GO:0003700|GO:0006355
Tpr4g0447 331 Pfam AP2 domain 142 193 IPR001471 GO:0003700|GO:0006355
Tpr4g0447 331 PRINTS Ethylene responsive element binding protein signature 42 53 IPR001471 GO:0003700|GO:0006355
Tpr4g0447 331 PRINTS Ethylene responsive element binding protein signature 183 203 IPR001471 GO:0003700|GO:0006355
Tpr4g0447 331 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 316 - -
Tpr4g0447 331 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR-RELATED 1 316 - -
Tpr4g0447 331 MobiDBLite consensus disorder prediction 273 288 - -
Tpr4g0447 331 SMART rav1_2 143 207 IPR001471 GO:0003700|GO:0006355
Tpr4g0447 331 SMART rav1_2 41 113 IPR001471 GO:0003700|GO:0006355
Tpr4g0447 331 Gene3D AP2/ERF domain 41 109 IPR036955 GO:0003700|GO:0006355
Tpr4g0447 331 Gene3D AP2/ERF domain 142 203 IPR036955 GO:0003700|GO:0006355
Tpr4g0447 331 SUPERFAMILY DNA-binding domain 142 203 IPR016177 GO:0003677
Tpr4g0447 331 ProSiteProfiles AP2/ERF domain profile. 143 201 IPR001471 GO:0003700|GO:0006355
Tpr4g0447 331 MobiDBLite consensus disorder prediction 1 44 - -
Tpr4g0447 331 SUPERFAMILY DNA-binding domain 40 109 IPR016177 GO:0003677
Tpr4g0447 331 MobiDBLite consensus disorder prediction 7 24 - -
Tpr4g0447 331 ProSiteProfiles AP2/ERF domain profile. 41 107 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0447 Tpr-Chr4 4304918 4312673 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0447 137 209 AP2-EREBP Transcription Factor Family AT5G57390 39.506 9.88e-10 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Tpr4g0447 AP2 4.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0447 K09285 - gmx:100807781 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0447 4 4304918 4312673 Tpr4g0447 4 4304918 4312673 ECH