Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0437 ATGGGCAATACATGCCGTGGATCTTTGAAAGGAAAATACATCCAGGGCTTCACCCAGCCCGAGTCAGATCATTCTTCCAAGCGTAGCACAACTCGTTCTTCTCGTTCTTCTGACTCAGATCACCACAACAACACCACCAATACCAAACAATCTCAACAACCCTTCACCTTTAAGAACGACAGCATGCGTCGTGGCCCTGATAATCAGTCTTATTATGTCTTAGGTCATAAGACTCCCAATATTCGTGATCTCTACACTCTTGGCCGTAAACTTGGTCAAGGTCAATTTGGCACCACTTATTTAGCCACCGACAATTCAACATCCATTGAATATGCTTGCAAATCCATTTCCAAGAGGAAACTTATTTCCAAGGAAGATGTTGAGGATGTTAGGAGAGAAATTCAGATTATGCACCATTTGGCCGGTCACAAGAACATTGTCACCATCAAAGGTGCCTATGAGGATGCACTCTATGTTCATATTGTCATGGAGCTATGTTCTGGTGGTGAATTGTTTGATCGCATCATTCAGAGAGGTCACTATACCGAAAGGAAGGCTGCTGAGTTGACCAAAATTATTGTTGGTGTTGTCGAGGCCTGTCATTCCCTTGGTGTTATGCACAGAGATCTCAAGCCTGAAAACTTTTTATTGGTCAACAAAGACGATGATTTCTCTCTTAAAGCTATTGACTTTGGCCTCTCCGTTTTCTTCAAACCAGGTCAAGTTTTCACCGATGTAGTTGGCAGCCCATACTATGTTGCTCCTGAGGTTCTCCTCAAGCATTATGGCCCTGAAGCAGATGTGTGGACGGCCGGTGTCATACTTTATATATTGCTCAGTGGTGTGCCGCCGTTTTGGGCAGAGACCCAGCAGGGTATATTTGATGCGGTATTGAAGGGACATATAGATTTTGACTCAGATCCATGGCCTCTAATATCTGATAGTGGAAAAGACCTTATCAGAAAGATGCTGTGTTCTCGGCCTTCAGATCGGTTGACTGCTCATGAAGTTTTATGTCATCCTTGGATATGTGAAAATGGAGTTGCCCCAGACAGAGCATTGGACCCTGCTGTTCTTTCTCGTCTCAAACAGTTTTCTGCAATGAATAAGCTAAAGAAGATGGCTTTACGGGTAATTGCTGAAAGTCTTTCCGAGGAGGAAATTGCTGGTTTGAGAGAAATGTTCCAGGCTATGGATACTGATAACAGCGGTGCAATCACTTTTGATGAACTAAAAGCTGGTCTAAGAAGATATGGGTCTACCCTTAAGGATACAGAAATACGTGATCTTATGGAAGCGGCTGATGTGGACAACAGTGGAACTATAGATTATGGAGAGTTTATTGCTGCAACAGTTCATCTCAACAAACTGGAGCGTGAGGAACATCTTGTTGCAGCATTCCGATATTTTGACAAGGACGGAAGTGGTTATATTACAGTTGATGAACTTCAACAAGCTTGTGCAGAACATAACATGACCGATGTTTTTCTTGAAGATATTATCAGGGAAGTTGATCAAGATAACGATGGGAGGATTGATTATGGTGAATTTTCTGCCATGATGCAAAAAGGCAATGTTGGGATTGGTAGGAGGACTATGCGCAACAGTCTGAATTTGAGCATGCGGGACGCACCAAGTGCTCAATAG 1647 0.4311 MGNTCRGSLKGKYIQGFTQPESDHSSKRSTTRSSRSSDSDHHNNTTNTKQSQQPFTFKNDSMRRGPDNQSYYVLGHKTPNIRDLYTLGRKLGQGQFGTTYLATDNSTSIEYACKSISKRKLISKEDVEDVRREIQIMHHLAGHKNIVTIKGAYEDALYVHIVMELCSGGELFDRIIQRGHYTERKAAELTKIIVGVVEACHSLGVMHRDLKPENFLLVNKDDDFSLKAIDFGLSVFFKPGQVFTDVVGSPYYVAPEVLLKHYGPEADVWTAGVILYILLSGVPPFWAETQQGIFDAVLKGHIDFDSDPWPLISDSGKDLIRKMLCSRPSDRLTAHEVLCHPWICENGVAPDRALDPAVLSRLKQFSAMNKLKKMALRVIAESLSEEEIAGLREMFQAMDTDNSGAITFDELKAGLRRYGSTLKDTEIRDLMEAADVDNSGTIDYGEFIAATVHLNKLEREEHLVAAFRYFDKDGSGYITVDELQQACAEHNMTDVFLEDIIREVDQDNDGRIDYGEFSAMMQKGNVGIGRRTMRNSLNLSMRDAPSAQ* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0437 548 SUPERFAMILY EF-hand 367 524 IPR011992 -
Tpr4g0437 548 ProSiteProfiles EF-hand calcium-binding domain profile. 458 493 IPR002048 GO:0005509
Tpr4g0437 548 ProSitePatterns EF-hand calcium-binding domain. 471 483 IPR018247 -
Tpr4g0437 548 ProSitePatterns EF-hand calcium-binding domain. 505 517 IPR018247 -
Tpr4g0437 548 SUPERFAMILY Protein kinase-like (PK-like) 67 367 IPR011009 -
Tpr4g0437 548 SMART serkin_6 85 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0437 548 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 4 46 533 - -
Tpr4g0437 548 MobiDBLite consensus disorder prediction 40 66 - -
Tpr4g0437 548 ProSiteProfiles EF-hand calcium-binding domain profile. 386 421 IPR002048 GO:0005509
Tpr4g0437 548 Gene3D Phosphorylase Kinase; domain 1 87 170 - -
Tpr4g0437 548 MobiDBLite consensus disorder prediction 1 73 - -
Tpr4g0437 548 Pfam EF-hand domain pair 461 522 IPR002048 GO:0005509
Tpr4g0437 548 Pfam EF-hand domain pair 391 451 IPR002048 GO:0005509
Tpr4g0437 548 Gene3D Transferase(Phosphotransferase) domain 1 171 352 - -
Tpr4g0437 548 CDD STKc_CAMK 85 342 - -
Tpr4g0437 548 Pfam Protein kinase domain 85 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0437 548 ProSiteProfiles EF-hand calcium-binding domain profile. 422 457 IPR002048 GO:0005509
Tpr4g0437 548 Gene3D - 353 525 - -
Tpr4g0437 548 SMART efh_1 462 490 IPR002048 GO:0005509
Tpr4g0437 548 SMART efh_1 496 524 IPR002048 GO:0005509
Tpr4g0437 548 SMART efh_1 390 418 IPR002048 GO:0005509
Tpr4g0437 548 SMART efh_1 426 454 IPR002048 GO:0005509
Tpr4g0437 548 ProSitePatterns EF-hand calcium-binding domain. 399 411 IPR018247 -
Tpr4g0437 548 ProSitePatterns EF-hand calcium-binding domain. 435 447 IPR018247 -
Tpr4g0437 548 MobiDBLite consensus disorder prediction 25 39 - -
Tpr4g0437 548 ProSitePatterns Serine/Threonine protein kinases active-site signature. 205 217 IPR008271 GO:0004672|GO:0006468
Tpr4g0437 548 ProSiteProfiles Protein kinase domain profile. 85 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0437 548 PANTHER SERINE/THREONINE-PROTEIN KINASE 46 533 - -
Tpr4g0437 548 ProSitePatterns Protein kinases ATP-binding region signature. 91 114 IPR017441 GO:0005524
Tpr4g0437 548 ProSiteProfiles EF-hand calcium-binding domain profile. 497 527 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0437 Tpr-Chr4 4188249 4195271 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0437 1 544 EF-hand Containing Proteins AT2G17290 84.771 0.0 954
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Tpr4g0437 Pkinase 2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0437 K13412 - gmx:100778173 1000.73