Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0435 ATGCTGTCTCCGGCGGCAATGAAGGTGTTGCTGTTACTTCTTGTTCTTCTAGTAACAGCAACATCAGCAGATCTAGATTCCCAGAGAGCTGCATTGCTAGCTCTCCGTTCTTCCGTCGGCGGCCGAACACTTTTCTGGAACGCTACCAATCAGACTCCCTGCAACTGGGCCGGCGTCCAATGCGACCGCGACCGAGTCGTCGAACTTCACCTTCCCGCCGTCGCTCTTTCTGGTCAAATACCCACTGGCATATTCTCCAATCTCACCCATCTCCGTACACTCAGTCTCCGTTTCAATGCTCTCACCGGTTCACTCCCTTCAGATCTCTCATCCTGCGTCGACCTCAGGAACCTTTACCTTCAGCGAAACCTTCTCTCCGGCGAAATTCCTGAGTTCCTGTTCAACTTACCTGAATTGGTTAGACTCAACATGGGTTTCAACAACTTCTCAGGTTCTATTTCAAACTCATTCAACAACTTCACAAGACTCAAAACCCTCTTCCTTGAAAACAACCAACTTTCAGGTTCCATCCCGGTGTTGGACCGGCTCAGCCTCGATCAGTTCAATGTCTCTAACAATCTCTTGAACGGCTCCGTTCCCCAAAACCTCCGGACTTTCTCTCAAGATTCCTTTTTGGGTAATTCCCTCTGCGGCAAACCTCTTTCTCTCTGCCCCGGCGAAACCGGAACTGATTCTTCTTCACCTTTTACTGCCTCGCCTGGTAACAAAAGCAACAAGAAAAATAAATTGTCCGGTGGAGCCATTGCTGGAATCGTAATTGGATCTATAGCGGCTCTTCTTTTGCTCGTTTTCCTTTTGATCTTCCTGTGCAGGAACAAGAGCAGCAAGAAGACCAGTGCTGTTGATGTTGCAGCTGTGAAACAACACCCAGAATCTGAAGTTGTTTCTCATGACAAGTCTATTTCTGACTTGGAAAATGGCAATGGATACCCTACCGCTGCTGCTGCTGCTGCGGCGGCAGTTGCAGTCAACAAGGTTGAAGCAAATGGCAATGGAAATGCTGCAGCTGGTGGTGGAGCTAAGAAGTTGGTGTTTTTTGGGAAAGCAGAGAGGGCTTTTGATCTGGAGGATTTGTTGAGGGCATCGGCGGAGGTGTTGGGTAAAGGGACGTTTGGGACGGCGTATAAGGCAGTATTGGAGTCAGGGCCGGTGGTGGCGGTGAAAAGGTTGAAGGATGTCACAATAACTGAGAAGGAGTTCAGGGAGAAGATTGAAGCGGTAGGAGCAGTAGATCATCAGAGTTTGGTACCTCTAAGGGCTTACTATTTTACCAGGGATGAGAAGCTCCTTGTTTATGATTACATGTCAATGGGAAGCCTCTCTGCACTTTTGCATGGAAACAAAGGAGCAGGTAGGACACCGCTGAATTGGGAAATGAGATCAGGCATTGCACTTGGAGCAGCCCGTGGCATTGAGTACCTTCATTCACAAGGGCCTAATGTTTCCCATGGAAACATAAAGTCGTCTAATATTCTCCTAACCAAGTCATATGATGCAAGAGTGTCTGATTTTGGGCTTTCACAGCTTGTTGGCCCCTCCTCTACCCCAAACCGTGTTGCCGGGTACCGTGCACCAGAAGTAACTGATCCTCGCAAAGTGTCTCAAAAGGCAGATGTGTACAGTTTTGGCGTATTGCTCTTAGAACTTCTGACCGGGAAGGCACCTACACATGCTCTTCTAAATGAAGAAGGTGTAGATCTCCCCAGATGGGTTCAGTCAGTCGTTAGAGAAGAGTGGACTTCTGAAGTGTTTGATCTTGAGCTCCTTAGGTATCAGAATGTTGAAGAGGAAATGGTTCAGTTGTTGCAACTTGCTGTTGATTGTGCGGCACAATACCCTGACAAGCGCCCTTCAATGTCCGATGTGGTACGGAGCATAGAAGAGTTACGTCGATCTAGCTTGAAAGAGGAGCAAGACCAAATCCAACATGACAACAATGATATAGAATTGTAG 1974 0.4792 MLSPAAMKVLLLLLVLLVTATSADLDSQRAALLALRSSVGGRTLFWNATNQTPCNWAGVQCDRDRVVELHLPAVALSGQIPTGIFSNLTHLRTLSLRFNALTGSLPSDLSSCVDLRNLYLQRNLLSGEIPEFLFNLPELVRLNMGFNNFSGSISNSFNNFTRLKTLFLENNQLSGSIPVLDRLSLDQFNVSNNLLNGSVPQNLRTFSQDSFLGNSLCGKPLSLCPGETGTDSSSPFTASPGNKSNKKNKLSGGAIAGIVIGSIAALLLLVFLLIFLCRNKSSKKTSAVDVAAVKQHPESEVVSHDKSISDLENGNGYPTAAAAAAAAVAVNKVEANGNGNAAAGGGAKKLVFFGKAERAFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVVAVKRLKDVTITEKEFREKIEAVGAVDHQSLVPLRAYYFTRDEKLLVYDYMSMGSLSALLHGNKGAGRTPLNWEMRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDARVSDFGLSQLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSDVVRSIEELRRSSLKEEQDQIQHDNNDIEL* 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0435 657 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 9 651 - -
Tpr4g0435 657 Gene3D Ribonuclease Inhibitor 26 137 IPR032675 -
Tpr4g0435 657 SUPERFAMILY Protein kinase-like (PK-like) 371 634 IPR011009 -
Tpr4g0435 657 Gene3D Phosphorylase Kinase; domain 1 336 441 - -
Tpr4g0435 657 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Tpr4g0435 657 Pfam Leucine rich repeat 79 125 IPR001611 GO:0005515
Tpr4g0435 657 ProSitePatterns Protein kinases ATP-binding region signature. 373 395 IPR017441 GO:0005524
Tpr4g0435 657 PANTHER OS05G0588300 PROTEIN 9 651 - -
Tpr4g0435 657 CDD STKc_IRAK 373 636 - -
Tpr4g0435 657 Coils Coil 638 657 - -
Tpr4g0435 657 Gene3D Ribonuclease Inhibitor 139 224 IPR032675 -
Tpr4g0435 657 ProSiteProfiles Leucine-rich repeat profile. 162 184 IPR001611 GO:0005515
Tpr4g0435 657 SUPERFAMILY L domain-like 45 206 - -
Tpr4g0435 657 Gene3D Transferase(Phosphotransferase) domain 1 442 656 - -
Tpr4g0435 657 Pfam Protein kinase domain 370 631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0435 657 ProSiteProfiles Protein kinase domain profile. 367 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0435 Tpr-Chr4 4170644 4173962 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0435 22 637 Receptor kinase-like Gene Family AT1G48480 64.274 0.0 797
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Tpr4g0435 Pkinase 1.7e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0435 - - gmx:100818955 952.584