Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0432 ATGGGGATTTGCTGGAGTTATCCACCTAATAAAGATCCAACTCCAACTGGAACTGTTACACCTGCAGGGATATCTCATTCTCAGACCACAAGTGGAAGCTATGGTAGCTATGGTATTAGTACCACCACCACCACCACTGCTTCAACAACTACTACTTTCAATTCTGTTTCTACCACTTCTTCTGGAAATGGAAGCAGCAGTAATATATCTTCCTCCATAAGTAGAAGCAACTTCTCCTCAGTTTCTGATTATTCAATTGGTGGCCAGATCTTACCTACTTCTAATTTGAGGATCTTTACTTTTGCTGAATTAAAGGCTGCTACCAAGAATTTCAAACCTGATACACTTCTTGGTGAAGGAGGTTTTGGTAAAGTTTACAAGGGATGGCTTGATTCCAAGAATAGTAGTGGAACTACTGTTGCCGTCAAAAAATTGAACTCCGAAAGCTACCAAGGACTCGAGGAGTGGAAGTCAGAAATAAATTTTCTAGGACGGCTTTATCATCCTAACCTTGTTAAGCTGTTGGGATATTGTTACGAGGAATCAGAACTTCTTCTTGTCTATGAATACTTGCAGAGGGGCAGTTTGGAACATCATCTCTTTGGAAGGGGTGCTTCTGTTCACCCACTTCCCTGGGATCTCAGGCTTAAGATAGCAATTGGAGCAGCCGCTGGCCTTTCCTTCTTGCATACATCCGATCGAGAAATTATTTACCGAGACTTCAAGGCCTCTAATATACTGCTTGATGGGTCCTATAATGCAAAGATATCAGATTTTGGACTTGCTAAGTTGGGTCCTTCAGCTAGTCAATCCCACTTATCAACAACTGTAATGGGCACACCTGGTTATGCAGCTCCTGAATATATGCAAACAGGGCATCTATATGTAAAGAGCGACGTGTATGGGTTTGGAGTTGTTTTGGTTGAGATACTCACAGGCCAACGATCCATTGATACCGACCGTCCAACTGGGTATCACAGTCTAATAGACTGGATCAAACCACACCTACTTGATAAAAAAAAATTGAAGAATGTTATGGATGATCATTTGAAAGATAACTATCCAATGAAAGCTGCATTTCCTATAGCTAAGCTGGCTTTAAAATGTCTTGAACCTAAGCCCAAAATGCGCCCGTCCATGAAGGATGTTTTGGAGACGTTGCAGGGAATTTAA 1173 0.416 MGICWSYPPNKDPTPTGTVTPAGISHSQTTSGSYGSYGISTTTTTTASTTTTFNSVSTTSSGNGSSSNISSSISRSNFSSVSDYSIGGQILPTSNLRIFTFAELKAATKNFKPDTLLGEGGFGKVYKGWLDSKNSSGTTVAVKKLNSESYQGLEEWKSEINFLGRLYHPNLVKLLGYCYEESELLLVYEYLQRGSLEHHLFGRGASVHPLPWDLRLKIAIGAAAGLSFLHTSDREIIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHLSTTVMGTPGYAAPEYMQTGHLYVKSDVYGFGVVLVEILTGQRSIDTDRPTGYHSLIDWIKPHLLDKKKLKNVMDDHLKDNYPMKAAFPIAKLALKCLEPKPKMRPSMKDVLETLQGI* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0432 390 ProSiteProfiles Protein kinase domain profile. 111 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0432 390 PANTHER OS01G0588500 PROTEIN-RELATED 45 390 - -
Tpr4g0432 390 CDD STKc_IRAK 117 390 - -
Tpr4g0432 390 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Tpr4g0432 390 ProSitePatterns Protein kinases ATP-binding region signature. 117 144 IPR017441 GO:0005524
Tpr4g0432 390 Pfam Protein tyrosine and serine/threonine kinase 115 387 IPR001245 GO:0004672|GO:0006468
Tpr4g0432 390 Gene3D Transferase(Phosphotransferase) domain 1 191 390 - -
Tpr4g0432 390 SUPERFAMILY Protein kinase-like (PK-like) 81 387 IPR011009 -
Tpr4g0432 390 PANTHER SERINE/THREONINE-PROTEIN KINASE PIX13-RELATED 45 390 - -
Tpr4g0432 390 Gene3D Phosphorylase Kinase; domain 1 95 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0432 Tpr-Chr4 4138672 4144465 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0432 54 387 Glycoside Hydrolase AT3G07070 44.478 2.56e-95 289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tpr4g0432 PK_Tyr_Ser-Thr 5.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0432 - - mtr:MTR_5g099130 554.288