Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0422 ATGATCTGTGATAATATATTAGCTTCATTCAATACAAGAGATAGAAAGTTAAGAGTTTTTAGAGAGAGAAACAAAATGGGTTGTTGTCAATCTTCTTTGTTTAGAAGAAGAGTAAGAGAGAATCATCATCATCCTGAAAAACAACAACAGCAACAACCCTACCATCACCAGCTTCAGCACCGTAACAACAACAACAACAACAACAATCTGAATCAAATTGATGGTGAAAAAGAATCAGCAACGGTGGATCCTTCATCTTTTACTTTCTCTGAGTTTTCATTATCAGACTTGAAAGCAGCAACTAATAATTTCAGCTCAGAGTATATTGTTTCTGAGAGTGGTGAAAAAGCACCTAACTTGGTTTATAAAGGTAGGTTACAGAATCAGAAACGTTGGATTGCTGTTAAGAAGTTCAGTAAAGCTGCTTGGCCGGATCCAAAACAATTTGTTGAAGAAGCTTCTGGTGTTGGAAAATTGCGTCATCCTAGGCTTGCTAATTTGATTGGTTATTGTTGTGACGGTGATGAAAGATTACTTGTTGCTGAGTTTATGCCTAATGATACCTTAGCCAAACACCTCTTTCACTGGGAAAATCAGACTATTGAGTGGGCCATGAGGTTAAGAGTTGCTCTTTATATTGCACAAGCTTTGCATTATTGTACTTCTGAGGGACGGCCCTTATACCATGATTTGAATGCTTATCGCGTTCTATTTGATGAGGAAGGTGATCCACGTCTGTCTTGTTTTGGTTTAATGAAGAACAGCAGGGATGGAAAAAGTTACAGCACAAACCTTGCTTACACACCTCCTGAATATTTAAGAAATGGAAGAGTCACTCCTGAAAGTGTCATTTACAGCTTTGGAACAGTTCTTCTCGACCTACTCAGTGGCAAGCACATCCCTCCTAGTCATGGAAAAAACAACATGCTCTTGATGGATTCTCATTTGGAAGGAAAGTTTTCTACAGAAGAGGCAACAGTAGTTGTCAATCTTGCCTCTAAATGTTTGCAATATGAACCGCGAGAACGGCCTAATACAAAGGATTTGGTCACAACGCTTGCTCCATTGCACACAAAACCCGATGTTCGTTCTCACATCATGCTTGGAATTCCAAAGCAAGAAGAAGCTCCATCAACCCCACAACGTCCTCTTTCAGCAATGGGCGAGGCTTGCTCAAGAATGGACCTCACTGCAATACATCAGATCTTGGTTGCAACCCACTACAGAGATGATGAAGGGACTAATGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGCGGAGACTATGCATTCCGTGACAAGGATTTTAAGACAGCCATTGATAACTATTCTCAGTTCATTGATGTGGGAACGATGGTCTCTCCCACAGTTTTTGCAAGGCGCAGTCTATGCTACCTGTTATGTGATCAACCAGATCCTGCTCTACGAGATGCAATGCAAGCACAATGCGTATATCCAGACTGGCCCACAGCTTTCTACATGCAGTCTGTTGCTCTTGCAAAGCTGGACATGCACAAGGATGCAGCTGACATGTTAAATGAGGCGGCTGCATTAGAAGAGAAGAAGCAAAGAGGAGCAAGAGGATCATAG 1617 0.4162 MICDNILASFNTRDRKLRVFRERNKMGCCQSSLFRRRVRENHHHPEKQQQQQPYHHQLQHRNNNNNNNNLNQIDGEKESATVDPSSFTFSEFSLSDLKAATNNFSSEYIVSESGEKAPNLVYKGRLQNQKRWIAVKKFSKAAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEFMPNDTLAKHLFHWENQTIEWAMRLRVALYIAQALHYCTSEGRPLYHDLNAYRVLFDEEGDPRLSCFGLMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPNTKDLVTTLAPLHTKPDVRSHIMLGIPKQEEAPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMVSPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKKQRGARGS* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0422 538 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 26 536 IPR045845 GO:0004672|GO:0009742
Tpr4g0422 538 Gene3D Tetratricopeptide repeat domain 427 536 IPR011990 GO:0005515
Tpr4g0422 538 SUPERFAMILY TPR-like 430 532 IPR011990 GO:0005515
Tpr4g0422 538 SUPERFAMILY Protein kinase-like (PK-like) 84 357 IPR011009 -
Tpr4g0422 538 Pfam Protein tyrosine and serine/threonine kinase 121 353 IPR001245 GO:0004672|GO:0006468
Tpr4g0422 538 Gene3D Transferase(Phosphotransferase) domain 1 185 370 - -
Tpr4g0422 538 ProSiteProfiles Protein kinase domain profile. 107 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0422 538 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 26 536 - -
Tpr4g0422 538 Gene3D Phosphorylase Kinase; domain 1 76 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0422 Tpr-Chr4 4023739 4031867 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0422 20 361 Glycoside Hydrolase AT3G07070 31.892 7.34e-48 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Tpr4g0422 PK_Tyr_Ser-Thr 8.7e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0422 K14500 - gmx:100808907 910.983