Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0415 ATGAAGCCTTATATTTTCTTGTTACCTATGTCTTGGTATCTATACCTTCATTTGCTTAATCTTTTTACCTTAACTTTAATGTGTTTTGCTCCAAACAGAACTTTGACAATGGCACAAGGAAACCAAACTGATCATTTGGCTTTGCTCCAATTCAAGCAACTAATATCCAGTGATCCATATGGTATCCTTGATTCTTGGAATAGTTCAACTCACTTTTGCAAATGGCATGGAATCATATGCAGTCCCAAGCATCAAAGAGTTACAAGGTTGACGTTGGAAGGAAACAAGTTGCATGGATCCATATCTCCATATGTTGGCAATCTCTCTCATATGAGATTCCTCAACCTTCAAAACAATAGCTTCTACGGTAAAATTCCACAAGAATTGGGTCGTTTGTTTAGATTAAGGTACCTCTTTCTAAACAACAACTCGTTTTCAGGAGAATTTCCTATAAACTTGACAAATTGCTCAGAGCTCATAACTATGCACTTAGGTGCAAACAAACTGATTGGCAAAATACCTAGTCAAATTGGATCTCTTGTAAAGCTTCAAGCTCTTTCCATGGAAAAAAACAATTTGTCAGGAAAAATTCCACCATCCATAAGAAATCTTGCATCTCTTACTAAATTTTTTATTGGTTTCAATCAATTAGAGGAAAATATTCCACAAGAAATTTGCTGCCTAAAACAGTTGAAGATTATAGCAGTTCATATCAACAAATTGTCGGGTACATTTCCTTCTTGTCTTTATAATATGTCATCTCTTACTGTAATCTCAGCTGTAGACAATAATTTTAATGGATCTCTTCCACACAATATGTTCCACACTCTTCCCAATCTCCAATTTTTTTCAATTGGAGTAAATAGTTTCTCGGGTCATATACCCACTTCCATTGCAAATGCTTCAACTTTAACAGTACTTGTGATTCCTACAAACCATTTTGTCGGACAAGTTCCAAATCTAGGTAAGCTACAAAGTCTGAGAGTGCTTAATTTGGAAGACAACAATTTAGGAGACAATTCCACAAAGGATTTGGAGTTTTTAAACTCATTAACAAATTGTAGTAAGTTGCAAACGCTCGGTTTAGCCGCTAATAATTTTGGAGGTACTTTGCAAAATTCTATAGGTAATTTGTCCACCACACTTAATCTATTATCTTTCGAGGGTAATCAAATATATGGACAAATTCCTACAGAATTAGGAAATCTAATTAGCTTGAGTCTCTTGACTATGGAATATAACAATTTCGAAGGAACAATTCCAACTACTTTCGGAAAGTTTCAAAAGATACAAATGTTAACAATGTTCGGAAACAATTTATCAGGGGCTATACCATCTTTCATAGGCAACCTTAGTCAATTGTATGCTTTGAGACTAGATGGAAATATGTTTGAAGGTAATATTCCTCCAAATATTGGAAATTGTCAAAGGTTACAATACTTAGACATTTCACACAACAACCTTAGTGGAGTCATACCCTTAGAGATTTTCAACATTTCGTCTTTAACAAACACACTAAACTTGTCTCATAACTCATTGAGTGGTAGCTTACCAAAAGAAGTGGGTATGCTAAAAAATATTGATATGTTAGATGTTTCTAAGAATAATTTGTCAGGGGACATTCCTGAAACTATTGGTGAATGCATAAGTTTAGAATATCTTTATTTGGAAGGGAACTCCTTTAGAGGAACCATACCATCCTCTTTGGCATCGCTCAAAGGTCTTCAACGTTTAGATCTGTCTAGAAATCAATTGTCTGGAGCAATCCCAAAAAATTTGCAAAATATTTCTTTCCTAGAATATTTCAATGTTTCTTTCAACATGTTGGAAGGTGAAGTACCGACAGATGGTGTATTTGGAAATGCAACTCAAGTGGCAATTATTGGAAACAATAAGCTTTGTGGGGGTATTTCACAGCTGCATCTACCACCATGCCTTATCAAGGGTAGGAAACATGCAAAACACCATAAATTCAGGTTGATAGCAGTGATCGCTAGTGTGGTTTCTTTTCTTCTCATACTTTCATTTATTATAACTATCTACTGGATGAGAAAAAGAAATCTAAAACGACATTTTGATTCACCAACAATTGATCAACTAGCTAAGGTTTCATACCAAGACTTACATCGAGGAACAGATGGTTTCTCGCCTAGAAACTTGATCGGATCAGGAAGTTTTGGTTCTGTTTACAGAGGAAATCTTGTGTCAGAAGATAATGTTATTGCTGTGAAGGTCCTTAACCTACAAAAGAAGGGAGCTCGCAAGAGTTTCTTCGTTGAATGTAATGCACTCAAAAGCATTAGACACCGAAATTTAGTTAAGGTTTTAACATGTTGTTCTAGTACAGATTACAAAGGCCAAGAATTTAAAGCTTTAGTTTTTGATTACATGAAAAATGGAAGCTTAGAACAATGGTTGCATCCTGAGATTTTAAATGTAGAGACTCCAACAATACTGGACCTCAGTCATAGATTAAACATCATTATTGATGTTGCTTCTGCATTACATTATCTTCATCAAGAATGTGAGCAAATGGTCATTCATTGTGATCTAAAGCCAAGCAATGTCCTTCTCGATGAAGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTGTCTCAACCATTTCTGGCAATACCAGTACAATTGGAATCAGTGGGACTGTTGGCTATGCTCCTCCAGAGTATGGGATGGGTTCTGAAGTGTCCACATGTGGTGACATGTATAGCTTTGGAATCCTTATGTTGGAGATGCTTACCGGTAGAAGACCCACCGATGAAGTTTTCAAAGATGGTCAAAATCTGCATAACTTTGTTGCAATTTCATTTCCCAATAATCTTGGAAGTATATTTTACCCACATCTTGTATCAAGAGATGCGGAAGTGACAGAAGATGGAAGCATTGAAAATTCAGAGTGCTTAGTTTCACTTTTTAGGATTGGACTTGTTTGTTCAATGGAATCACCGAAGGAAAGAATGAATATTGTGGATGTCACTAGAGAGCTTAGCATAATCAGAAAGACCTTTTGTCACTGGTTTTCGCACTCATAA 3057 0.3588 MKPYIFLLPMSWYLYLHLLNLFTLTLMCFAPNRTLTMAQGNQTDHLALLQFKQLISSDPYGILDSWNSSTHFCKWHGIICSPKHQRVTRLTLEGNKLHGSISPYVGNLSHMRFLNLQNNSFYGKIPQELGRLFRLRYLFLNNNSFSGEFPINLTNCSELITMHLGANKLIGKIPSQIGSLVKLQALSMEKNNLSGKIPPSIRNLASLTKFFIGFNQLEENIPQEICCLKQLKIIAVHINKLSGTFPSCLYNMSSLTVISAVDNNFNGSLPHNMFHTLPNLQFFSIGVNSFSGHIPTSIANASTLTVLVIPTNHFVGQVPNLGKLQSLRVLNLEDNNLGDNSTKDLEFLNSLTNCSKLQTLGLAANNFGGTLQNSIGNLSTTLNLLSFEGNQIYGQIPTELGNLISLSLLTMEYNNFEGTIPTTFGKFQKIQMLTMFGNNLSGAIPSFIGNLSQLYALRLDGNMFEGNIPPNIGNCQRLQYLDISHNNLSGVIPLEIFNISSLTNTLNLSHNSLSGSLPKEVGMLKNIDMLDVSKNNLSGDIPETIGECISLEYLYLEGNSFRGTIPSSLASLKGLQRLDLSRNQLSGAIPKNLQNISFLEYFNVSFNMLEGEVPTDGVFGNATQVAIIGNNKLCGGISQLHLPPCLIKGRKHAKHHKFRLIAVIASVVSFLLILSFIITIYWMRKRNLKRHFDSPTIDQLAKVSYQDLHRGTDGFSPRNLIGSGSFGSVYRGNLVSEDNVIAVKVLNLQKKGARKSFFVECNALKSIRHRNLVKVLTCCSSTDYKGQEFKALVFDYMKNGSLEQWLHPEILNVETPTILDLSHRLNIIIDVASALHYLHQECEQMVIHCDLKPSNVLLDEDMVAHVSDFGIARLVSTISGNTSTIGISGTVGYAPPEYGMGSEVSTCGDMYSFGILMLEMLTGRRPTDEVFKDGQNLHNFVAISFPNNLGSIFYPHLVSRDAEVTEDGSIENSECLVSLFRIGLVCSMESPKERMNIVDVTRELSIIRKTFCHWFSHS* 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0415 1018 ProSiteProfiles Leucine-rich repeat profile. 477 498 IPR001611 GO:0005515
Tpr4g0415 1018 SMART LRR_typ_2 524 548 IPR003591 -
Tpr4g0415 1018 SMART LRR_typ_2 324 347 IPR003591 -
Tpr4g0415 1018 SMART LRR_typ_2 572 595 IPR003591 -
Tpr4g0415 1018 SMART LRR_typ_2 108 132 IPR003591 -
Tpr4g0415 1018 SMART LRR_typ_2 204 228 IPR003591 -
Tpr4g0415 1018 SMART LRR_typ_2 451 475 IPR003591 -
Tpr4g0415 1018 ProSiteProfiles Protein kinase domain profile. 715 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0415 1018 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Tpr4g0415 1018 Gene3D Ribonuclease Inhibitor 159 273 IPR032675 -
Tpr4g0415 1018 PANTHER OS04G0122200 PROTEIN 29 1013 - -
Tpr4g0415 1018 SUPERFAMILY L domain-like 41 337 - -
Tpr4g0415 1018 SMART serkin_6 715 1007 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0415 1018 ProSitePatterns Protein kinases ATP-binding region signature. 721 744 IPR017441 GO:0005524
Tpr4g0415 1018 SUPERFAMILY L domain-like 381 635 - -
Tpr4g0415 1018 PANTHER LRR RECEPTOR-LIKE KINASE 29 1013 - -
Tpr4g0415 1018 PRINTS Leucine-rich repeat signature 478 491 - -
Tpr4g0415 1018 PRINTS Leucine-rich repeat signature 572 585 - -
Tpr4g0415 1018 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Tpr4g0415 1018 Gene3D Phosphorylase Kinase; domain 1 696 796 - -
Tpr4g0415 1018 Gene3D Ribonuclease Inhibitor 350 645 IPR032675 -
Tpr4g0415 1018 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Tpr4g0415 1018 Pfam Protein kinase domain 719 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0415 1018 SUPERFAMILY Protein kinase-like (PK-like) 692 1004 IPR011009 -
Tpr4g0415 1018 Gene3D Transferase(Phosphotransferase) domain 1 797 1013 - -
Tpr4g0415 1018 Pfam Leucine Rich Repeat 477 494 IPR001611 GO:0005515
Tpr4g0415 1018 Gene3D Ribonuclease Inhibitor 274 349 IPR032675 -
Tpr4g0415 1018 Gene3D Ribonuclease Inhibitor 43 158 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0415 Tpr-Chr4 3964322 3968213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0415 41 1011 Receptor kinase-like Gene Family AT3G47570 46.349 0.0 851
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Tpr4g0415 Pkinase 5.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0415 - - mtr:MTR_5g025930 1424.45