Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0412 ATGGCTACACAAGCTCTAGTGTCGTCATCATCTCTTACCTTTGCAGCTGAAGCTGTGAGACAGAGTTTTGGAGCAAGATCACTCCCTTCTTCAATTGGGTCTTCTAGAAAAGGTTCCTTTGTTGTCAAGGCAACTGCTACTCCTCCTGTCAAGCAAGGTGGAGCAAATAGGCCTTTGTGGTTTGCATCAAAGCAAAGTCTTTCTTACTTGGACGGCAGCCTTCCAGGTGACTATGGATTTGATCCTCTAGGACTTTCAGATCCAGAAGGAACAGGAGGTTTCATTGAGCCAAGATGGCTAGCATACGGCGAGATAATCAATGGTCGCTACGCAATGTTGGGAGCAGTAGGAGCAATAGCACCTGAAATCCTCGGCAAAGCCGGTTTAATTCCACAAGAAACCGCTCTCGCTTGGTTCCAAACCGGTGTTATTCCACCAGCAGGAACATACAACTACTGGGCAGACAATTACACACTCTTTGTCTTAGAACTGGCACTTATGGGATTTGCAGAACATAGAAGATTCCAAGATTGGTATAACCCTGGTTCCATGGGAAAACAATACTTCTTAGGACTTGAAAAAGGTCTTGGTGGTTCTGGTGAACCAGCTTACCCTGGTGGACCTTTCTTTAACCCTCTTGGTTTTGGTAAAGATGAGAAATCATTGAAAGAGTTAAAGCTGAAAGAAGTTAAGAATGGAAGGTTAGCTATGTTGGCAATATTGGGTTACTTTGTTCAAGGTCTTGTTACAGGTGTTGGACCATATCAAAACCTTTTAGATCATTTGGCTGATCCTGTCAACAACAACATCTTGACCAGTCTCAAGTTCCACTAA 834 0.4376 MATQALVSSSSLTFAAEAVRQSFGARSLPSSIGSSRKGSFVVKATATPPVKQGGANRPLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLELALMGFAEHRRFQDWYNPGSMGKQYFLGLEKGLGGSGEPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVNNNILTSLKFH* 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0412 277 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 276 - -
Tpr4g0412 277 Gene3D Chlorophyll a/b binding protein domain 59 276 - -
Tpr4g0412 277 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 276 IPR001344 GO:0009765|GO:0016020
Tpr4g0412 277 SUPERFAMILY Chlorophyll a-b binding protein 56 273 - -
Tpr4g0412 277 Pfam Chlorophyll A-B binding protein 68 246 IPR022796 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0412 Tpr-Chr4 3946831 3948840 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0412 1 277 Chloroplast and Mitochondria Gene Families AT1G61520 87.365 6.44e-171 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0412 K08909 - gmx:100784090 484.567