Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0376 ATGCAGGCATCGGAGCAACATAGAAGTTCGAGTATGTACTATCAACCGTTGCAACAAATGGAAGCCTATTGCTTGCCGCAGTATCGAAATTTAAATCATCAGCTATACAACAATGATGGAGGCCACAGAACTCAATTATCGGCTCCAAGTTCTTCTGACCTTTATTACTGCACCTTGGAGTCGTCTTCTGCAGCTGGAAGTTTAGCCGTTTACAACTCTCCTTCAACTGTTAGTTTCTCGCCTAATGATAGTCCAATGTCGCAGCAAGATTCACAGTCATATCCACCTGATAAGTATCATTCCCCCGACAATACCTATGGCTCTCCAATGAGTGGATCGTGTATAACCGAAGATTTAAGTAGTTTTAAGCACAAGCTGAGAGAATTGGAAAATGTAATGCTTGGTCCTGACTCTGATAATCTTGATAGTTATGACAGTGCCATGAGCAACGGAACCAATTTCGGTTCGCTTGAAATGGACAGTTGGAGACAAACAATGGTAGCAATTTCGAGCAAAAATCTAAAGCATATCCTTACTGCATGTGCCAAAGCAATTGCAGACAATGATTATCTAATGGCACAGTGGCTGATGGACGAATTACGGCAGATGGTGTCGGTTTCTGGCGAACCGATTCAAAGGTTGGGAGCATACATGTTGGAAGGACTCGTTGCACGGTTGTCTGCTTCTGGGAGTTCAATTTACAAATCATTAAGATGCAAAGAACCGGAAAGTGCCGAGCTTCTCTCTTACATGAACATACTTTATGAGGTTTGCCCTTACTTCAAATTCGGATACATGTCTGCAAACGGAGCCATTGCAGAAGCAATGAAAAATGAAGCCAGAGTTCATATTATTGATTTCCAAATTTCTCAAGGAAGCCAATGGATTTCGTTGATTCAAGCTTTTGCAGCTAGGCCTGGTGGGCCGCCGCACATCCGTATCACAGGTATCGATGATCCGACCTCAGCTTATGCCCGGGGAGGTGGACTACATATAGTTGAAAAGAGGTTATTAAAGCTTGCTCAGCATTTCAAAGTCCCGTTTGAATTTCATGCCGCAGCTATCTCCGGTTGTGATGTTCAACTGCATAACCTCGGAGTTCGACCTGGAGAAGCTCTTGCGGTAAATTTTGCATTCATGCTACACCACATGCCTGATGAGAGTGTCAGCACTCAGAATCATAGGGATAGGCTTCTGAGGTTAGTTAAGAGCCTATCACCAAAAGTTGTGACACTTGTCGAGCAAGAATCTAACACAAACACTGCAGCATTCTTTCCTCGTTTCCTTGAAACTATGGACTATTACACGGCAATGTTCGAGTCAATAGACGTGACTCTTCCAAGAGAGCATAAAGAGAGAATCAATGTTGAGCAGCATTGCTTGGCAAGAGACTTAGTTAACATCATAGCTTGTGAAGGGGTCGAGAGAGTGGAACGACACGAACTGCTAGGGAAGTGGAGATCAAGATTTGCAATGGCTGGTTTCACTCCTTACCCTTTGAGTTCATTGGTGAATGGTACCATAAAGAAATTGCTTGAGAATTACAGTGATAGATATAGACTTCAAGAGAAAGATGGAGCTTTATACCTTGGTTGGATGAATAGAGATTTGGTTGCTTCTTGTGCTTGGAAATGA 1635 0.4306 MQASEQHRSSSMYYQPLQQMEAYCLPQYRNLNHQLYNNDGGHRTQLSAPSSSDLYYCTLESSSAAGSLAVYNSPSTVSFSPNDSPMSQQDSQSYPPDKYHSPDNTYGSPMSGSCITEDLSSFKHKLRELENVMLGPDSDNLDSYDSAMSNGTNFGSLEMDSWRQTMVAISSKNLKHILTACAKAIADNDYLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLVARLSASGSSIYKSLRCKEPESAELLSYMNILYEVCPYFKFGYMSANGAIAEAMKNEARVHIIDFQISQGSQWISLIQAFAARPGGPPHIRITGIDDPTSAYARGGGLHIVEKRLLKLAQHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHELLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLQEKDGALYLGWMNRDLVASCAWK* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0376 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 544 IPR005202 -
Tpr4g0376 544 MobiDBLite consensus disorder prediction 78 99 - -
Tpr4g0376 544 ProSiteProfiles GRAS family profile. 165 544 IPR005202 -
Tpr4g0376 544 Pfam GRAS domain family 174 544 IPR005202 -
Tpr4g0376 544 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0376 Tpr-Chr4 3685419 3688506 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0376 12 544 GRAS Transcription Factor Family AT5G48150 65.121 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr4g0376 GRAS 7.4e-137 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0376 - - gmx:100808300 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0376 4 3685419 3688506 Tpr4g0376 4 3685419 3688506 ECH