Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g0375 | ATGATTACCCTGAAATGCAAAGTCAAGCACAGAACAAAGAGAAAATTGTGCTACAGTGCTATTGCTATGTCTGATCCAACGTATGATGTGTTCCTAAGCTTTAGAGGAGAAGATACACGTGACAACTTCACAAGTCATCTTTATGCAGAATTATGTAGGCAAAACATTGAAACATTCATAGATAATAGACTTGACAGAGGTGAAGAAATTTCACCAGCCTTATACAAAGCAATTCAAGAATCAACAATTTATGTCATCATTTTATCACAACACTATGCTTCTTCAAGTTGGTGCTTAGATGAACTCATTGAGATACTTAAATGTAAGGAGAGATATGAAAGGGAAGTCATACCTGTGTTCTATAAGGTTGATCCATCAAATGTTAGGCATCAAAGACAGAGTTATGCAGATGATTTAGTTAAGCATCATCAACGATTTGGTGACAAAGTCGATGCTTGGAAGGCTTCTCTAACCCAAGTAGCTGGACTTTCAGGCTGGGATTCACAAAAAACCAGACCTGAAAGCACACTTGTTACAGAGATTGTGGAAGACATTGTGAAAAAATTGAATCGTTGTGTCCCAAGTGATTATGAAGAAATGACAGGAATTGACAACCATATTGAAAAAATTCAATCCTTGTTGCTCCTCGAGTCACCGACTGTTCAAATCATAGGAATATGGGGCATGGGAGGGATAGGCAAAACAACAATTGCCAAAGCAATCTTTGATAAACTTGGAACTCATTTCGGATCCAAAAGCATTATTCGAAATGTTCAACAAGAAATAGAAAGAGCAGGACTATCCCATGTAAAAAAAGAATACTTATCACAACTTCTAAACGAAACAATTACATCCTCTGAATCAAATTCTTACGATCAAAGGCTGAAACGGACAAAGGGTCTTATTGTTTTTGATGATGTGAAAGATGCTGATCAACTTAAAGATTTAATCGGAACACATCATAAATTTGGCTCGGGGAGTAGAATCATTGTGACTAGTAGAGACAGGCAAGTGCTTGAGAATGCCAATGCTCATGAAATATATCAAGTTAGGGAAATGGATGATCAAGATTCTCTACAACTCTTCTGTTTATGTGCCTTTAAACAAAAACAGCCGATTGAATCTTTTGCGAGCTTAACAGAAAAGGTTTTAGCTTATGCTCAAGGGCTTCCATTAGCTCTCAAAGTTTTGGGCTCATTGCTTTATGGAAAATCGGAGAAAGTATGGGAAAGTGAGCTGCAAAAGCTTAAAAAGCTTCCAGATCTTAATATTTTCAGATTGTTGAAGTTGAGTTATGATGGACTTGACGACGAACAAAAGAATATCTTTCTTGATATAGCTTGCTTCTATACAGGAGAACCGGAGAAAGCTGTAGCACTCGCATTGGATTCTTCTGGTTTCTCTGCTTCTAAAGGAATAGATGATCTCAGTGATAGGATCCTTATATCTATTTCAAACGGTAGAGTTTGGATGCATGATCTAATACAAGAAATGGGGCATGAAATTGTTAGGCTTCAATGTGCCAATGATCCTGGAAAACGTAGTCGATTATGGAAGACTAACGATGTTTATGACGTTTTAAGTAAGAACAAGGGAAAGGGAACAGATGCAATCCAATGTATATTTCTAAACATGGATGAAATAAAGAATGTTCAACTGCATGCTGATACATTTAAGAAAATGCATAATCTTAGAATGATCAAGTTCTACACTCACTTTAGGAATAACTCAAATGTGACCTTTCATGCGTTTCTTAAGCGTTTTCCTAATGATTTAAAATTTCTTCGTTGGGATGGCTTCCCTCAAAGATCTTTGCCGCAAGACTTTTGCCCAAAAAATCTTGCTACACTTGATATGTCTTATAGCCATCTTGAACAACTTTGGGAGGGGGATCAGGCTTTACCAAATTTGAAAAGGCTCAACCTCAGTTATTCTAAGAAGCTGGTTCGAGTACCGGACCTCTCCTTATCTCCAAATATTGAAGAAATAATTCTTACTGATTGTATAAGTTTGGTACAAGTTTATTCCTCTAGTTTCCTTGACAAGCTTAACTGGTTATATTTAGCTGGTTGTACCAAACTTGAGAGGTTAGATGTTCGTAGTAATATTCTGTCGAGATCATCTGGATTAGTTGCTCTCCCAAATTGTTACAAACTTGAAAAGCTTTTAATAAGCGGTAGAACTGATGTGGTTCAATCATACAACTGTTCTGATTTTTATGTATATTCTAACTGGGAAAGAAAAATATTTGTTAGTAAGTCGATGGCAATAGAGCTGAATAATGCGGGGGATTACGAGATTTGTGATCTGGATTCAAATACTATTGTTAGAAGTATCAATGACCTTTGTTGGTTGGATATTTCGAATTGTAGGTCCCTAACATGTCTACCAGCTGAACTTTTCAATTCGAAGTTTCTTAGAAGACTTTGTCTCCGTAGTTGTTTACAGTTGGAGGAGTTACCTGAAATCAAGGAGACTATGGAAAATCTAAAAGTGCTTATTTTAGACGAAACAGCAATAAAAGAACTACCTTCATCCTTGCACCTTTTGGTCGGACTTGAAGAATTGAGCTTGCAATGTTGCAAAAAGCTTAAGGCTATTCCATCTTCCATTGGAAATCTTAGTAAACTCTTGGAGTTAGAACTTACCTACTGTGAGTCACTTGAAACTTTTCTGAGCAGCATTTTCAAATTGAAATTGACAAGACTCGATTTCTATGGTTGCCCAATGCTTGGGACCTTTCCAGAAATACCAAATGAGGTTGGCCGGTTGTCATCCTTGACTGAACTTTCACTGCAAGGAAGTAGTATTGTGAACCTTCCTGAGAGTATAGCTCATCTGTCAAGTTTGAGATCACTTAATTTAAGTGATTGCAAATTGCTTGAATGTGTACCAAAGCTTCCACCAAATCTAAACCAAGTTTTGGCATTTGATTGTCATTCCATGAAGAGAATGATGCTAAATTCAGGGTCTGATTCCAAAGAAGGAATTGCAGTTCCTGATTGGTTCCCTCACCGTTGTCAAGGACATTCAATAAGTATAAGCAGCGATGATTTATATTTGTACGAGAGAAACAGGCTTATTGGTTTCGCTCTGTGTGTGGTTTTGGGGCATGACTTTCCATACGAAATCTCTCGGTTTGATATTAGCTTTGCATATGCATTAAAATTTGAGTCTGATGGTCGAATACACTTACGTTCCAACAAGCTTGAAGTTGAATATGATAGGCATAGGCTAGGTCATAATAGAAGAATTTCCCAACATAACACATTCTTATGGAAGTATAAATTGAACTCGTCAAGAATTGGAAGATTTGCCGAGGCTTTCACTTTTGAGATCCTAGATGGGAATCGTCGTCTCTTAAGTTATCCAACAACCATGATGGTGAAAGAATGTGGAATATATCCTCTGTATGCCAAAGAAAATGATGATAATAGCATTCATGAACCAAGTGGGGACGGCAAAAGAGACCAAACAAATTCTGTGTCTAGGTGCAGGTGGTACGAGTGGTAG | 3513 | 0.3732 | MITLKCKVKHRTKRKLCYSAIAMSDPTYDVFLSFRGEDTRDNFTSHLYAELCRQNIETFIDNRLDRGEEISPALYKAIQESTIYVIILSQHYASSSWCLDELIEILKCKERYEREVIPVFYKVDPSNVRHQRQSYADDLVKHHQRFGDKVDAWKASLTQVAGLSGWDSQKTRPESTLVTEIVEDIVKKLNRCVPSDYEEMTGIDNHIEKIQSLLLLESPTVQIIGIWGMGGIGKTTIAKAIFDKLGTHFGSKSIIRNVQQEIERAGLSHVKKEYLSQLLNETITSSESNSYDQRLKRTKGLIVFDDVKDADQLKDLIGTHHKFGSGSRIIVTSRDRQVLENANAHEIYQVREMDDQDSLQLFCLCAFKQKQPIESFASLTEKVLAYAQGLPLALKVLGSLLYGKSEKVWESELQKLKKLPDLNIFRLLKLSYDGLDDEQKNIFLDIACFYTGEPEKAVALALDSSGFSASKGIDDLSDRILISISNGRVWMHDLIQEMGHEIVRLQCANDPGKRSRLWKTNDVYDVLSKNKGKGTDAIQCIFLNMDEIKNVQLHADTFKKMHNLRMIKFYTHFRNNSNVTFHAFLKRFPNDLKFLRWDGFPQRSLPQDFCPKNLATLDMSYSHLEQLWEGDQALPNLKRLNLSYSKKLVRVPDLSLSPNIEEIILTDCISLVQVYSSSFLDKLNWLYLAGCTKLERLDVRSNILSRSSGLVALPNCYKLEKLLISGRTDVVQSYNCSDFYVYSNWERKIFVSKSMAIELNNAGDYEICDLDSNTIVRSINDLCWLDISNCRSLTCLPAELFNSKFLRRLCLRSCLQLEELPEIKETMENLKVLILDETAIKELPSSLHLLVGLEELSLQCCKKLKAIPSSIGNLSKLLELELTYCESLETFLSSIFKLKLTRLDFYGCPMLGTFPEIPNEVGRLSSLTELSLQGSSIVNLPESIAHLSSLRSLNLSDCKLLECVPKLPPNLNQVLAFDCHSMKRMMLNSGSDSKEGIAVPDWFPHRCQGHSISISSDDLYLYERNRLIGFALCVVLGHDFPYEISRFDISFAYALKFESDGRIHLRSNKLEVEYDRHRLGHNRRISQHNTFLWKYKLNSSRIGRFAEAFTFEILDGNRRLLSYPTTMMVKECGIYPLYAKENDDNSIHEPSGDGKRDQTNSVSRCRWYEW* | 1171 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g0375 | 1170 | Pfam | C-JID domain | 996 | 1141 | IPR045344 | - | |
Tpr4g0375 | 1170 | Pfam | Leucine Rich Repeat | 613 | 632 | IPR011713 | - | |
Tpr4g0375 | 1170 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 190 | 446 | IPR027417 | - | |
Tpr4g0375 | 1170 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 19 | 166 | IPR035897 | - | |
Tpr4g0375 | 1170 | Gene3D | - | 23 | 189 | IPR035897 | - | |
Tpr4g0375 | 1170 | Gene3D | Ribonuclease Inhibitor | 915 | 984 | IPR032675 | - | |
Tpr4g0375 | 1170 | Pfam | TIR domain | 28 | 202 | IPR000157 | GO:0007165 | |
Tpr4g0375 | 1170 | Gene3D | Ribonuclease Inhibitor | 754 | 914 | IPR032675 | - | |
Tpr4g0375 | 1170 | PRINTS | Disease resistance protein signature | 223 | 238 | - | - | |
Tpr4g0375 | 1170 | PRINTS | Disease resistance protein signature | 294 | 308 | - | - | |
Tpr4g0375 | 1170 | PRINTS | Disease resistance protein signature | 387 | 401 | - | - | |
Tpr4g0375 | 1170 | PRINTS | Disease resistance protein signature | 945 | 961 | - | - | |
Tpr4g0375 | 1170 | Pfam | NB-ARC domain | 204 | 417 | IPR002182 | GO:0043531 | |
Tpr4g0375 | 1170 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 24 | 722 | - | - | |
Tpr4g0375 | 1170 | PANTHER | RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED | 778 | 1048 | - | - | |
Tpr4g0375 | 1170 | SUPERFAMILY | RNI-like | 592 | 836 | - | - | |
Tpr4g0375 | 1170 | Gene3D | - | 352 | 436 | IPR042197 | - | |
Tpr4g0375 | 1170 | SMART | till_3 | 27 | 163 | IPR000157 | GO:0007165 | |
Tpr4g0375 | 1170 | SUPERFAMILY | L domain-like | 767 | 982 | - | - | |
Tpr4g0375 | 1170 | SUPERFAMILY | "Winged helix" DNA-binding domain | 424 | 527 | IPR036390 | - | |
Tpr4g0375 | 1170 | Gene3D | - | 190 | 350 | IPR027417 | - | |
Tpr4g0375 | 1170 | Gene3D | Ribonuclease Inhibitor | 517 | 746 | IPR032675 | - | |
Tpr4g0375 | 1170 | ProSiteProfiles | TIR domain profile. | 26 | 189 | IPR000157 | GO:0007165 | |
Tpr4g0375 | 1170 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 24 | 722 | IPR044974 | GO:0006952 | |
Tpr4g0375 | 1170 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 778 | 1048 | IPR044974 | GO:0006952 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g0375 | Tpr-Chr4 | 3668775 | 3673840 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g0375 | 782 | 994 | WRKY Transcription Factor Family | AT4G12020 | 30.047 | 5.26e-12 | 68.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g0375 | - | - | gmx:100814075 | 992.26 |