Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0375 ATGATTACCCTGAAATGCAAAGTCAAGCACAGAACAAAGAGAAAATTGTGCTACAGTGCTATTGCTATGTCTGATCCAACGTATGATGTGTTCCTAAGCTTTAGAGGAGAAGATACACGTGACAACTTCACAAGTCATCTTTATGCAGAATTATGTAGGCAAAACATTGAAACATTCATAGATAATAGACTTGACAGAGGTGAAGAAATTTCACCAGCCTTATACAAAGCAATTCAAGAATCAACAATTTATGTCATCATTTTATCACAACACTATGCTTCTTCAAGTTGGTGCTTAGATGAACTCATTGAGATACTTAAATGTAAGGAGAGATATGAAAGGGAAGTCATACCTGTGTTCTATAAGGTTGATCCATCAAATGTTAGGCATCAAAGACAGAGTTATGCAGATGATTTAGTTAAGCATCATCAACGATTTGGTGACAAAGTCGATGCTTGGAAGGCTTCTCTAACCCAAGTAGCTGGACTTTCAGGCTGGGATTCACAAAAAACCAGACCTGAAAGCACACTTGTTACAGAGATTGTGGAAGACATTGTGAAAAAATTGAATCGTTGTGTCCCAAGTGATTATGAAGAAATGACAGGAATTGACAACCATATTGAAAAAATTCAATCCTTGTTGCTCCTCGAGTCACCGACTGTTCAAATCATAGGAATATGGGGCATGGGAGGGATAGGCAAAACAACAATTGCCAAAGCAATCTTTGATAAACTTGGAACTCATTTCGGATCCAAAAGCATTATTCGAAATGTTCAACAAGAAATAGAAAGAGCAGGACTATCCCATGTAAAAAAAGAATACTTATCACAACTTCTAAACGAAACAATTACATCCTCTGAATCAAATTCTTACGATCAAAGGCTGAAACGGACAAAGGGTCTTATTGTTTTTGATGATGTGAAAGATGCTGATCAACTTAAAGATTTAATCGGAACACATCATAAATTTGGCTCGGGGAGTAGAATCATTGTGACTAGTAGAGACAGGCAAGTGCTTGAGAATGCCAATGCTCATGAAATATATCAAGTTAGGGAAATGGATGATCAAGATTCTCTACAACTCTTCTGTTTATGTGCCTTTAAACAAAAACAGCCGATTGAATCTTTTGCGAGCTTAACAGAAAAGGTTTTAGCTTATGCTCAAGGGCTTCCATTAGCTCTCAAAGTTTTGGGCTCATTGCTTTATGGAAAATCGGAGAAAGTATGGGAAAGTGAGCTGCAAAAGCTTAAAAAGCTTCCAGATCTTAATATTTTCAGATTGTTGAAGTTGAGTTATGATGGACTTGACGACGAACAAAAGAATATCTTTCTTGATATAGCTTGCTTCTATACAGGAGAACCGGAGAAAGCTGTAGCACTCGCATTGGATTCTTCTGGTTTCTCTGCTTCTAAAGGAATAGATGATCTCAGTGATAGGATCCTTATATCTATTTCAAACGGTAGAGTTTGGATGCATGATCTAATACAAGAAATGGGGCATGAAATTGTTAGGCTTCAATGTGCCAATGATCCTGGAAAACGTAGTCGATTATGGAAGACTAACGATGTTTATGACGTTTTAAGTAAGAACAAGGGAAAGGGAACAGATGCAATCCAATGTATATTTCTAAACATGGATGAAATAAAGAATGTTCAACTGCATGCTGATACATTTAAGAAAATGCATAATCTTAGAATGATCAAGTTCTACACTCACTTTAGGAATAACTCAAATGTGACCTTTCATGCGTTTCTTAAGCGTTTTCCTAATGATTTAAAATTTCTTCGTTGGGATGGCTTCCCTCAAAGATCTTTGCCGCAAGACTTTTGCCCAAAAAATCTTGCTACACTTGATATGTCTTATAGCCATCTTGAACAACTTTGGGAGGGGGATCAGGCTTTACCAAATTTGAAAAGGCTCAACCTCAGTTATTCTAAGAAGCTGGTTCGAGTACCGGACCTCTCCTTATCTCCAAATATTGAAGAAATAATTCTTACTGATTGTATAAGTTTGGTACAAGTTTATTCCTCTAGTTTCCTTGACAAGCTTAACTGGTTATATTTAGCTGGTTGTACCAAACTTGAGAGGTTAGATGTTCGTAGTAATATTCTGTCGAGATCATCTGGATTAGTTGCTCTCCCAAATTGTTACAAACTTGAAAAGCTTTTAATAAGCGGTAGAACTGATGTGGTTCAATCATACAACTGTTCTGATTTTTATGTATATTCTAACTGGGAAAGAAAAATATTTGTTAGTAAGTCGATGGCAATAGAGCTGAATAATGCGGGGGATTACGAGATTTGTGATCTGGATTCAAATACTATTGTTAGAAGTATCAATGACCTTTGTTGGTTGGATATTTCGAATTGTAGGTCCCTAACATGTCTACCAGCTGAACTTTTCAATTCGAAGTTTCTTAGAAGACTTTGTCTCCGTAGTTGTTTACAGTTGGAGGAGTTACCTGAAATCAAGGAGACTATGGAAAATCTAAAAGTGCTTATTTTAGACGAAACAGCAATAAAAGAACTACCTTCATCCTTGCACCTTTTGGTCGGACTTGAAGAATTGAGCTTGCAATGTTGCAAAAAGCTTAAGGCTATTCCATCTTCCATTGGAAATCTTAGTAAACTCTTGGAGTTAGAACTTACCTACTGTGAGTCACTTGAAACTTTTCTGAGCAGCATTTTCAAATTGAAATTGACAAGACTCGATTTCTATGGTTGCCCAATGCTTGGGACCTTTCCAGAAATACCAAATGAGGTTGGCCGGTTGTCATCCTTGACTGAACTTTCACTGCAAGGAAGTAGTATTGTGAACCTTCCTGAGAGTATAGCTCATCTGTCAAGTTTGAGATCACTTAATTTAAGTGATTGCAAATTGCTTGAATGTGTACCAAAGCTTCCACCAAATCTAAACCAAGTTTTGGCATTTGATTGTCATTCCATGAAGAGAATGATGCTAAATTCAGGGTCTGATTCCAAAGAAGGAATTGCAGTTCCTGATTGGTTCCCTCACCGTTGTCAAGGACATTCAATAAGTATAAGCAGCGATGATTTATATTTGTACGAGAGAAACAGGCTTATTGGTTTCGCTCTGTGTGTGGTTTTGGGGCATGACTTTCCATACGAAATCTCTCGGTTTGATATTAGCTTTGCATATGCATTAAAATTTGAGTCTGATGGTCGAATACACTTACGTTCCAACAAGCTTGAAGTTGAATATGATAGGCATAGGCTAGGTCATAATAGAAGAATTTCCCAACATAACACATTCTTATGGAAGTATAAATTGAACTCGTCAAGAATTGGAAGATTTGCCGAGGCTTTCACTTTTGAGATCCTAGATGGGAATCGTCGTCTCTTAAGTTATCCAACAACCATGATGGTGAAAGAATGTGGAATATATCCTCTGTATGCCAAAGAAAATGATGATAATAGCATTCATGAACCAAGTGGGGACGGCAAAAGAGACCAAACAAATTCTGTGTCTAGGTGCAGGTGGTACGAGTGGTAG 3513 0.3732 MITLKCKVKHRTKRKLCYSAIAMSDPTYDVFLSFRGEDTRDNFTSHLYAELCRQNIETFIDNRLDRGEEISPALYKAIQESTIYVIILSQHYASSSWCLDELIEILKCKERYEREVIPVFYKVDPSNVRHQRQSYADDLVKHHQRFGDKVDAWKASLTQVAGLSGWDSQKTRPESTLVTEIVEDIVKKLNRCVPSDYEEMTGIDNHIEKIQSLLLLESPTVQIIGIWGMGGIGKTTIAKAIFDKLGTHFGSKSIIRNVQQEIERAGLSHVKKEYLSQLLNETITSSESNSYDQRLKRTKGLIVFDDVKDADQLKDLIGTHHKFGSGSRIIVTSRDRQVLENANAHEIYQVREMDDQDSLQLFCLCAFKQKQPIESFASLTEKVLAYAQGLPLALKVLGSLLYGKSEKVWESELQKLKKLPDLNIFRLLKLSYDGLDDEQKNIFLDIACFYTGEPEKAVALALDSSGFSASKGIDDLSDRILISISNGRVWMHDLIQEMGHEIVRLQCANDPGKRSRLWKTNDVYDVLSKNKGKGTDAIQCIFLNMDEIKNVQLHADTFKKMHNLRMIKFYTHFRNNSNVTFHAFLKRFPNDLKFLRWDGFPQRSLPQDFCPKNLATLDMSYSHLEQLWEGDQALPNLKRLNLSYSKKLVRVPDLSLSPNIEEIILTDCISLVQVYSSSFLDKLNWLYLAGCTKLERLDVRSNILSRSSGLVALPNCYKLEKLLISGRTDVVQSYNCSDFYVYSNWERKIFVSKSMAIELNNAGDYEICDLDSNTIVRSINDLCWLDISNCRSLTCLPAELFNSKFLRRLCLRSCLQLEELPEIKETMENLKVLILDETAIKELPSSLHLLVGLEELSLQCCKKLKAIPSSIGNLSKLLELELTYCESLETFLSSIFKLKLTRLDFYGCPMLGTFPEIPNEVGRLSSLTELSLQGSSIVNLPESIAHLSSLRSLNLSDCKLLECVPKLPPNLNQVLAFDCHSMKRMMLNSGSDSKEGIAVPDWFPHRCQGHSISISSDDLYLYERNRLIGFALCVVLGHDFPYEISRFDISFAYALKFESDGRIHLRSNKLEVEYDRHRLGHNRRISQHNTFLWKYKLNSSRIGRFAEAFTFEILDGNRRLLSYPTTMMVKECGIYPLYAKENDDNSIHEPSGDGKRDQTNSVSRCRWYEW* 1171
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0375 1170 Pfam C-JID domain 996 1141 IPR045344 -
Tpr4g0375 1170 Pfam Leucine Rich Repeat 613 632 IPR011713 -
Tpr4g0375 1170 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 446 IPR027417 -
Tpr4g0375 1170 SUPERFAMILY Toll/Interleukin receptor TIR domain 19 166 IPR035897 -
Tpr4g0375 1170 Gene3D - 23 189 IPR035897 -
Tpr4g0375 1170 Gene3D Ribonuclease Inhibitor 915 984 IPR032675 -
Tpr4g0375 1170 Pfam TIR domain 28 202 IPR000157 GO:0007165
Tpr4g0375 1170 Gene3D Ribonuclease Inhibitor 754 914 IPR032675 -
Tpr4g0375 1170 PRINTS Disease resistance protein signature 223 238 - -
Tpr4g0375 1170 PRINTS Disease resistance protein signature 294 308 - -
Tpr4g0375 1170 PRINTS Disease resistance protein signature 387 401 - -
Tpr4g0375 1170 PRINTS Disease resistance protein signature 945 961 - -
Tpr4g0375 1170 Pfam NB-ARC domain 204 417 IPR002182 GO:0043531
Tpr4g0375 1170 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 24 722 - -
Tpr4g0375 1170 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 778 1048 - -
Tpr4g0375 1170 SUPERFAMILY RNI-like 592 836 - -
Tpr4g0375 1170 Gene3D - 352 436 IPR042197 -
Tpr4g0375 1170 SMART till_3 27 163 IPR000157 GO:0007165
Tpr4g0375 1170 SUPERFAMILY L domain-like 767 982 - -
Tpr4g0375 1170 SUPERFAMILY "Winged helix" DNA-binding domain 424 527 IPR036390 -
Tpr4g0375 1170 Gene3D - 190 350 IPR027417 -
Tpr4g0375 1170 Gene3D Ribonuclease Inhibitor 517 746 IPR032675 -
Tpr4g0375 1170 ProSiteProfiles TIR domain profile. 26 189 IPR000157 GO:0007165
Tpr4g0375 1170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 722 IPR044974 GO:0006952
Tpr4g0375 1170 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 778 1048 IPR044974 GO:0006952
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tpr4g0375 Tpr-Chr4 3668775 3673840 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0375 782 994 WRKY Transcription Factor Family AT4G12020 30.047 5.26e-12 68.9
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0375 - - gmx:100814075 992.26