Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr4g0361 | ATGGCATTGCTTCGACCTTCATCTTTCCTAATCTTATTGGCATATGGTGCACTAATAGTCATAGCCACATTGACACCATGTTGGTATGTCATGGTCACACATATTGAGAAACATGTGAATTTGCACTCAGCAAATATTGTGTCCCAATTGCAATCACAAGTTGAGTACTCTAATCAACTCTTACAACCAATTAAATCATCATCAACAAATTTATCAAGATTATTGAGTTCAACCCTTAATTCTACTAACATCACTTTCTTTGATGTTAACACCAAGGTTGCTCCGGTGTTATTTCAAGCGTTGAAGACAATTCCTCAATTAACACAAATCTCATACTTGGGAGTGGAAGGTCTTTTTTTCACACATTACAAGGATGGTGATCAAGTTCTAGCAATGTACTCTAACTCATCAAGTCGGGGTATATCAAATAAAACCATATACTATATTCAACCCGTAAATCCTGACACCGGAGAGATTATTGGTGAAGCCCTGATTTCTAATATGACTATCAATATTGATGCAAGTTGGATAAATGGAGCAAATAATATTTCACAAGAATTTGTATCATTGGGAACAAAGTTGAGCAATGTTAGTGATCTTTTGTTCATAAATTCAGCTAGAATCAATAGAATAGGAGGGATCTCTCTTGGATTTTCGGCAAACACATTAACCGATTATGTGACTCGCACTGTCGATCGTCAAGGGACAAAATCGTATTTGGCTACCAAAGACGGGAAAGTTATTGCAAAAGGAATTCAAAATATTCGTTTGATGGTTTTTAACGATAGTGTTTCTTTACAATCTTTGAATGCTAATGGTGATCTAATAAAGAATGAGGGAATTGTATCTTGCAAGGATCAAGTTGATGGTTCAAGTTTGAATATTCAAGATACTCAATATTTGATTCATTGCTACCCCATTGATATTATGGGAATAGAAACGGTATATGTATTGGCTGTCCCACAAAATGAAATTCTCAGCATTAATCCAAGTTACTACAAACAAAAGGGATTAATACTCATGATTGTGATGATGGTTGTAATATTCATGTCTCTCTTGAGTTTTCTATTCATGAATGTTGGAGTCAAAAGAAGAGAAATGCAATTATGTGCTTCACTCATAAAACAAATGGAAGCAACAGAACAAGCTGAAAGAAAACATATGAACAAGAGTCTTGCTTTTGCTAGTGCTAGCCATGATGTTCGTGCTTATCTTGCTGGTCTTGTTGGTTTGATTGAGATGTCTTCTAAATTAGTTGTTTCTAATTCAGAATTAGACAAACCACATTCTGAATTAGAGACTAATTTAAAACAAATGGATAATTGTGCACAAGACTTGCTAGGATTGTTAAATTCTATACTTGACACAAGCAAAATTGAGGCAGGAAAAATGCAACTAGAGGAAGAGGAATTTGATTTATCATATCTCCTTGAAGATGTAGTTGATTTGTACTATCCAATTGCAATGAAGAAAGGTGTAGAACTTGTATTGGATCCTTGTAATGGTTCTGTTATCAAATACTCACATGTGAAAGGTGATAGAAGAAAATTGAAGCAAGTTTTGTGTAACTTGTTAAGCAATGCTGTTAAATTTACTGATGAAGGACATATAACAGTTAGAGCATGGACTCAGAAAGCAACATTGCAAAATTCAATTATCAAGACCAACCAAAATATAAGTGTTGTGAAACCTTTTTCTTGGTTGTTTGATAAGAAAAATAAGGAATCTGAGGACATTGAAGCTGTGAATTCTATTCAACATGATCCTTGTTTTATGGATTTTGTATTTGAAGTGGATGATACAGGGAAAGGAATTCCTAAAGAGAATCATAAGTCAGTGTTTGAGAATTATGTTCAAGTTAAAGAGAATTCTGTTGGTCAAGTTGGAACTGGCTTAGGACTTGGAATTGTGCAGTCATTGGTACGTTTGATGCATGGAGATATTGCAATTGTGGACAAAGAAGTTGGCAAAAAAGGAACATGCTTCAAGTTCAATGTACTTCTCACTACATGTGAGAATGAGACAGTAACTTATAGCTTAAGGGAAGGTTTTGAGTATGGATCAACCTCAGGTAACAAAAACCAAACTCAAGATAGAAAAACCCTTCACTCTACTAGTTCTGGTTCAAGCATTTGTTCATCGAGTCCAAGATTACAAATTTGTCCCTCTTCTAGTACTACTAAGCCTGAGCCTTCACATGTTATTCTCTACCTTGCTGATGAAGAAAGAAGAAGAACTTCACAGTTGTTCATAGAAAGCTTAGGGATTAAAGTTATGGTTATCAAGAATAGGAAACATCTAACTCATACTCTCAAGAAGTTCAAAAAACCAAAGGGTCATCAAATCAGTGATCAAAGTTCATCAGAATCTTCAGAAATAAGTTCTAGGTGTACATCTTATAGTTCTTCTTATAGTAGAAGATTTCCTTTGAGGGCTATGGATCATGGAAATGAATTTGTATCGTCGATGTTCAACAAGACAAATATTGGAGCTGCACCAAGTTTTGTTTTGATTATCATTGATACAAATGTAGGACCATTTTCTAAGCTTAGTAAGATTGTGTCAAATTTTAAGAAAGATGTTCTTAATCCTAGTAAAGTTGTTTGGTTAGAAAAGCCTTTTGAAAATAGTGTTGATTTCAAGAAAATTGATCAAGATGATATTGTGATATCAAAACCATTTCATGGTAGTAGATTGTTTCAAGTTATAAAGCTTCTTCCTGAATTTGGTGGTAATTGGAAAAGCAATAATTCTAGTAAATCAAGAAGAGAATTTAGATCACAATCTAATGATGAAAGTGTGTGTCTAAGTGTGGAACAATATTGTTGGAAGGGAAGTCAAAAATCTTATAAGGGGAAAAAATATTCTGTTCATCAAGGTGAAATACAAGAATGTGGTGACTCAAGTAATTCTAAACCTTTGAGTGGAAAGAAATTTTTGGTTGCTGATGATGATAAAATCTCGAGAAAGATTGCTATGGCTAAATTGAGGTCACTTGGTGTGAGTACTATTGACCAATGTGAGAATGGTGTAGAGGGTGTGAGATTAGTTGAAGAGGGTTTAACTAAGGATTTTTCTAATCCTCCTTATGATTACATCATAATGGATTTCCAGATGCCAGAGATGGATGGGTTTGAGGCAACAAGGAAGATAAGAGAGATGGGGAAAAGATGTGGCCTTCACATTCCTATCATTGCATTATCTGCTGAAATTGATAAATTGACCACAGAAACTGGAATGGACTTTCACATAACCAAGCCTATTAACGAGGAGCATTTACTCAAAGCAATTACATGCATAGAAAATAGTGACATAATGTAG | 3321 | 0.3454 | MALLRPSSFLILLAYGALIVIATLTPCWYVMVTHIEKHVNLHSANIVSQLQSQVEYSNQLLQPIKSSSTNLSRLLSSTLNSTNITFFDVNTKVAPVLFQALKTIPQLTQISYLGVEGLFFTHYKDGDQVLAMYSNSSSRGISNKTIYYIQPVNPDTGEIIGEALISNMTINIDASWINGANNISQEFVSLGTKLSNVSDLLFINSARINRIGGISLGFSANTLTDYVTRTVDRQGTKSYLATKDGKVIAKGIQNIRLMVFNDSVSLQSLNANGDLIKNEGIVSCKDQVDGSSLNIQDTQYLIHCYPIDIMGIETVYVLAVPQNEILSINPSYYKQKGLILMIVMMVVIFMSLLSFLFMNVGVKRREMQLCASLIKQMEATEQAERKHMNKSLAFASASHDVRAYLAGLVGLIEMSSKLVVSNSELDKPHSELETNLKQMDNCAQDLLGLLNSILDTSKIEAGKMQLEEEEFDLSYLLEDVVDLYYPIAMKKGVELVLDPCNGSVIKYSHVKGDRRKLKQVLCNLLSNAVKFTDEGHITVRAWTQKATLQNSIIKTNQNISVVKPFSWLFDKKNKESEDIEAVNSIQHDPCFMDFVFEVDDTGKGIPKENHKSVFENYVQVKENSVGQVGTGLGLGIVQSLVRLMHGDIAIVDKEVGKKGTCFKFNVLLTTCENETVTYSLREGFEYGSTSGNKNQTQDRKTLHSTSSGSSICSSSPRLQICPSSSTTKPEPSHVILYLADEERRRTSQLFIESLGIKVMVIKNRKHLTHTLKKFKKPKGHQISDQSSSESSEISSRCTSYSSSYSRRFPLRAMDHGNEFVSSMFNKTNIGAAPSFVLIIIDTNVGPFSKLSKIVSNFKKDVLNPSKVVWLEKPFENSVDFKKIDQDDIVISKPFHGSRLFQVIKLLPEFGGNWKSNNSSKSRREFRSQSNDESVCLSVEQYCWKGSQKSYKGKKYSVHQGEIQECGDSSNSKPLSGKKFLVADDDKISRKIAMAKLRSLGVSTIDQCENGVEGVRLVEEGLTKDFSNPPYDYIIMDFQMPEMDGFEATRKIREMGKRCGLHIPIIALSAEIDKLTTETGMDFHITKPINEEHLLKAITCIENSDIM* | 1107 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr4g0361 | 1106 | ProSiteProfiles | Response regulatory domain profile. | 978 | 1101 | IPR001789 | GO:0000160 | |
Tpr4g0361 | 1106 | MobiDBLite | consensus disorder prediction | 688 | 726 | - | - | |
Tpr4g0361 | 1106 | Gene3D | - | 464 | 675 | IPR036890 | - | |
Tpr4g0361 | 1106 | PRINTS | Bacterial sensor protein C-terminal signature | 594 | 608 | IPR004358 | GO:0016310|GO:0016772 | |
Tpr4g0361 | 1106 | PRINTS | Bacterial sensor protein C-terminal signature | 612 | 622 | IPR004358 | GO:0016310|GO:0016772 | |
Tpr4g0361 | 1106 | PRINTS | Bacterial sensor protein C-terminal signature | 628 | 646 | IPR004358 | GO:0016310|GO:0016772 | |
Tpr4g0361 | 1106 | SMART | REC_2 | 977 | 1097 | IPR001789 | GO:0000160 | |
Tpr4g0361 | 1106 | PANTHER | TWO-COMPONENT HISTIDINE KINASE | 34 | 1098 | - | - | |
Tpr4g0361 | 1106 | SMART | HisKA_10 | 389 | 462 | IPR003661 | GO:0000155|GO:0007165 | |
Tpr4g0361 | 1106 | SUPERFAMILY | CheY-like | 975 | 1099 | IPR011006 | - | |
Tpr4g0361 | 1106 | MobiDBLite | consensus disorder prediction | 772 | 794 | - | - | |
Tpr4g0361 | 1106 | Gene3D | - | 956 | 1103 | - | - | |
Tpr4g0361 | 1106 | CDD | REC_hyHK_CKI1_RcsC-like | 979 | 1097 | - | - | |
Tpr4g0361 | 1106 | Pfam | Response regulator receiver domain | 980 | 1097 | IPR001789 | GO:0000160 | |
Tpr4g0361 | 1106 | PANTHER | HISTIDINE KINASE CKI1-LIKE | 34 | 1098 | - | - | |
Tpr4g0361 | 1106 | CDD | HisKA | 390 | 458 | IPR003661 | GO:0000155|GO:0007165 | |
Tpr4g0361 | 1106 | Gene3D | - | 372 | 463 | - | - | |
Tpr4g0361 | 1106 | SUPERFAMILY | Homodimeric domain of signal transducing histidine kinase | 377 | 464 | IPR036097 | GO:0000155|GO:0007165 | |
Tpr4g0361 | 1106 | SUPERFAMILY | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 451 | 665 | IPR036890 | - | |
Tpr4g0361 | 1106 | Pfam | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 512 | 669 | IPR003594 | - | |
Tpr4g0361 | 1106 | ProSiteProfiles | Histidine kinase domain profile. | 396 | 670 | IPR005467 | - | |
Tpr4g0361 | 1106 | SMART | HKATPase_4 | 512 | 670 | IPR003594 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr4g0361 | Tpr-Chr4 | 3548806 | 3554987 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr4g0361 | 5 | 1090 | Histidine Kinase Gene Family | AT2G47430 | 38.509 | 0.0 | 674 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | Others | Tpr4g0361 | HATPase_c | 2.1e-25 | CL0025 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr4g0361 | - | - | cam:101504256 | 1216.45 |