Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0353 ATGAAGATGAAGAAGAAAAACTCAAAAACCCTCTTCATCAATACACTCATTTTCTTCTCCTTAATACAATTTCAAACCTCACTCTCACTCTCAGATTCTTCAACATCATTTCCCAAAGAAGCACTTCCTACAAAATCAGGTTATCTACCAATAAGTCCTACATCAACTTCCTCAATTTTCTACACATTTTATGAAGCAAAAAACTCAACTTCACCTCTCTCACAAACACCACTTCTCATTTGGCTTCAAGGTGGCCCTGGTTGCTCTTCCATGGTTGGCAACTTCTATGAACTAGGACCATATCTTATCACCAATTCACTCACCCTTCAACCTAACCATGCTTCTTGGAATAGAATATTTGGCCTTCTTTTTCTAGATAATCCCATTGGAACTGGATTCAGTGTAGCATCTACCCTACAAGAGATTCCAACCGATCAAACCACGGTCGCGGAACATCTTTTCGCGGCTATAACAAGGTTTGTTAAACTTGATCCTGTTTTTAAACATCGTCCTATTTATATTACTGGTGAAAGTTATGCTGGAAAATATGTTCCTGCAATTGGTTACTATATTTTAGAGAAAAATGCTAAGTTGAAAGATTTTGAGAGAGTGAATTTAGCTGGTGTTGCAATTGGTAATGGTTTAACTGATCCTGTGACTCAAATGGTTACTCATGCTGATAATGCTTATTATGTTGGATTAATCAATGAGAGGCAAAAAAATGAGTTGGTAAAAGCTCAAGTTGAAGCTGTTGAGTTGGTAGAGAGAAGGAATTGGAGTGAAGCAACTGATGCGCGAAACCGTGTCTTGAATCTGTTGCAAAATATGACAGGGTTGGCTACTTTGTATGATTATTCGCGGAAAATTCCTTACGAAGACTATTTGGTTGCGAAGTTCTTGAATATTGATGAGGTGAGAAAGGCCTTAGGAGTGAATGTTGATGAATCGTTTGTTTACGAGAAATGCAGTCACGTAGTTGGGGCTGCATTGCATGCTGATTTGATGAAGAGTGTAAAGTATATGGTGGAGAAATTATTGAATGAGGGGATGAGGGTTTTGTTGTATCAAGGTCAGCGCGATTTGAGGGTCGGTGTGGTTCAAGTCGAGGCTTGGGTGAAGACTATGAAGTGGGAAGGGATAGTTGAGTATGTGAATGCTGAGAGGGAGATTTGGAAGGTAAATGGAGAGGTAGCTGGTTATGTACAAAAATGGAAGTCATTTACTAATGTTGTGGTTTTAGGAGGTGGACATCTTTTGCCTACTGACCAACCTTTGAATTCGCAAGCTATGATTGAAGATTGGGTTTTGGAAAAGGGTTTGTTTGGAAATGTGTTGTACTCAAATGTATCCACAAAATCTTTGTATGATGAGTGA 1374 0.3886 MKMKKKNSKTLFINTLIFFSLIQFQTSLSLSDSSTSFPKEALPTKSGYLPISPTSTSSIFYTFYEAKNSTSPLSQTPLLIWLQGGPGCSSMVGNFYELGPYLITNSLTLQPNHASWNRIFGLLFLDNPIGTGFSVASTLQEIPTDQTTVAEHLFAAITRFVKLDPVFKHRPIYITGESYAGKYVPAIGYYILEKNAKLKDFERVNLAGVAIGNGLTDPVTQMVTHADNAYYVGLINERQKNELVKAQVEAVELVERRNWSEATDARNRVLNLLQNMTGLATLYDYSRKIPYEDYLVAKFLNIDEVRKALGVNVDESFVYEKCSHVVGAALHADLMKSVKYMVEKLLNEGMRVLLYQGQRDLRVGVVQVEAWVKTMKWEGIVEYVNAEREIWKVNGEVAGYVQKWKSFTNVVVLGGGHLLPTDQPLNSQAMIEDWVLEKGLFGNVLYSNVSTKSLYDE* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0353 457 Coils Coil 236 256 - -
Tpr4g0353 457 Pfam Serine carboxypeptidase 42 435 IPR001563 GO:0004185|GO:0006508
Tpr4g0353 457 Gene3D alpha/beta hydrolase 22 442 IPR029058 -
Tpr4g0353 457 PANTHER CARBOXYPEPTIDASE 28 443 - -
Tpr4g0353 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 112 124 IPR001563 GO:0004185|GO:0006508
Tpr4g0353 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 125 135 IPR001563 GO:0004185|GO:0006508
Tpr4g0353 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Tpr4g0353 457 PRINTS Carboxypeptidase C serine protease (S10) family signature 407 420 IPR001563 GO:0004185|GO:0006508
Tpr4g0353 457 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Tpr4g0353 457 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 28 443 IPR001563 GO:0004185|GO:0006508
Tpr4g0353 457 SUPERFAMILY alpha/beta-Hydrolases 43 436 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0353 Tpr-Chr4 3491993 3493857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0353 296 435 Calmodulin-binding Proteins AT2G22960 26.761 3.76e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0353 K09645 - gmx:100780822 674.085