Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0352 ATGGAAGCAAATAAAGAGGAGGCACTTAAGGCAGTAGAGATTGCTGAGAAGAAATATGCTCAGAGAGACTTTGCAGGCGCAAAAAACTATGCTTTAAAGGCGAAAACACTTTGTCCTGAGTTGGAGGGTATATCTCAAATGGTGTCCACATTTGATGTTTACATTGCTTCTGAGTTCAGACATAATGGTGAACTCGATTATTATTCAGTTCTCGGATTAAAACCTACTGCAGATAAAGAAGCGGTTAAAAGACAGTACAAGAAGTTGGCAGTGTTACTTCATCCTGATAAGAACAAATGTGTGGGAGCTGATGGTGCATTTAAGCTTGTTTCCGAGGCGTGGACTTGGCTTGACAATGCCATGCGTAGTTCTTACGATCGTAAGAGAAATTATGCTTCTTTTCATGCTACAGGTTATAACAAATGTTCCAATTTGTCAGCCTCTCGTAATAGACTAGACACGTTTTGGACAATTTGTACTTCTTGTAAGGTTCAGTATGAGTATCTACGTAAGTATGTGAATAAAAAACTCTCATGTAAGAACTGCCGTGGCATTTTCATCGCTGTTGAAACTGGAGCAGCCCCAGCAAATGGTTCGTTTCCATATACACCTTTGCCGTATGTGCCAGGAAATGGTTATGGAAATCATTCATTTGACGGGGTTACATATGTTCCTACTAATGCCACCTATTTTAATGGGAATGGTGTCCCAGGATACCGTTCTGGACACGGTTACGAGTATGTTTCAAATGTTTCGTTTCAGTTGGGCTCTGCTGGACTTATCCATCAAAATGGATCGGCCACTACCTTACCTGCTGGTTCCGTATATCGGGTTAATGGACATACAAAGAGGGGAAGACCAAAGGTCAAATCAGGAGTCAATGGAAGGCATCCTATGGTGGAGACTGTGGTCAATATAAACTCGCATGTATCTTTTTCCAGCAATGAACCACAGGAAGTTAAGCCAGGTAGACCTGAAAAGAAACGCAAAGTTACGGTGGGATCCGATTTCAGAAATGGCTATGTCGAGAAGGGTTCAAAATGTGCTTCGGAAGCAGTGGTTTCAAATGGCCAGAAGGTTTCCTGTGTAAATGAAATTCAAACCAAACATTGTTTCATGCCACCTCCATTTGATGCGAGAAAATTATTGATTGAGAAAGCCAGGACAGTTATTAGGAAGAAACTCGAAGAGATGAAGCTGTCATCTGAAGTTGCAACTCTGAATGAGAAAGAAAAAGCACAAGTTGATGTTTGTCCAGTCAAAAAAGAGACATGTAGGAGAGCACCTCTGAATGTTTCTGGCCTTCCGTTGGAGCAAGGAAAAGTCAATCCGATCTCAATAACTGTCCCTGATTCTGACTTTCATGACTTCGATAAAGATAGGACAGAGGAATGTTTCAAGCCAAAGCAAATATGGGCCTTATATGATGAGGAAGATGGAATGCCGCGATTGTATTGTCTGATCCGCGAGGTTATATCTGTTAATCCATTTAAGATTCATATCAGTTACTTGAATTCCAAAACTGATAGCGAATTCGGCTCAGTAAACTGGCTTGAATCAGGTTTTACCAAATCTTGTGGAAATTTCAGGGCTTGGACTTCAGATATTGTCGACCAAGTTAACATATTTTCTCATATTCTAAGCCGAGAGAAGGCTGGTCGAGGTGGTTGTGTTCGCATATATCCGAGAAGTGGAGATATTTGGGCTGTTTATCGAAATTGGTCACCAGATTGGAACCGATCTACACCAGACAAAGTAAGGCATGAATATGACATGGTGGAGGTGCTTTATGATTACTCCGAGGATCTTGGTGTTTGTGTTTGTCCCCTTATTAAATTATCCGGATTTAAAACAGTATACAAAAGGAATCCTGACAACGGTGCCGAAAGATGGATACCGAGAAGAGAAATGGTACGCTTTTCTCACCAAGTTCCGTATTGGTTACTCAAAGGGGAGGAAAGCAATTTGCCGGATCGGTGTTTTGACCTTGATCCAGCTGCAACTCCAGACGGGCTTCTTCATAATGCTACAGAAGGAAATGCTTTGTAG 2049 0.4153 MEANKEEALKAVEIAEKKYAQRDFAGAKNYALKAKTLCPELEGISQMVSTFDVYIASEFRHNGELDYYSVLGLKPTADKEAVKRQYKKLAVLLHPDKNKCVGADGAFKLVSEAWTWLDNAMRSSYDRKRNYASFHATGYNKCSNLSASRNRLDTFWTICTSCKVQYEYLRKYVNKKLSCKNCRGIFIAVETGAAPANGSFPYTPLPYVPGNGYGNHSFDGVTYVPTNATYFNGNGVPGYRSGHGYEYVSNVSFQLGSAGLIHQNGSATTLPAGSVYRVNGHTKRGRPKVKSGVNGRHPMVETVVNINSHVSFSSNEPQEVKPGRPEKKRKVTVGSDFRNGYVEKGSKCASEAVVSNGQKVSCVNEIQTKHCFMPPPFDARKLLIEKARTVIRKKLEEMKLSSEVATLNEKEKAQVDVCPVKKETCRRAPLNVSGLPLEQGKVNPISITVPDSDFHDFDKDRTEECFKPKQIWALYDEEDGMPRLYCLIREVISVNPFKIHISYLNSKTDSEFGSVNWLESGFTKSCGNFRAWTSDIVDQVNIFSHILSREKAGRGGCVRIYPRSGDIWAVYRNWSPDWNRSTPDKVRHEYDMVEVLYDYSEDLGVCVCPLIKLSGFKTVYKRNPDNGAERWIPRREMVRFSHQVPYWLLKGEESNLPDRCFDLDPAATPDGLLHNATEGNAL* 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0352 682 ProSiteProfiles dnaJ domain profile. 66 129 IPR001623 -
Tpr4g0352 682 CDD DnaJ 66 114 IPR001623 -
Tpr4g0352 682 PANTHER BNAC03G44070D PROTEIN 1 675 - -
Tpr4g0352 682 PANTHER BNAC03G44070D PROTEIN 1 675 - -
Tpr4g0352 682 Gene3D DnaJ domain 56 147 IPR036869 -
Tpr4g0352 682 SUPERFAMILY Chaperone J-domain 59 130 IPR036869 -
Tpr4g0352 682 Pfam Domain of unknown function (DUF3444) 446 653 IPR024593 -
Tpr4g0352 682 PRINTS DnaJ domain signature 68 86 IPR001623 -
Tpr4g0352 682 PRINTS DnaJ domain signature 86 101 IPR001623 -
Tpr4g0352 682 PRINTS DnaJ domain signature 102 122 IPR001623 -
Tpr4g0352 682 SMART dnaj_3 65 122 IPR001623 -
Tpr4g0352 682 Pfam DnaJ domain 66 126 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0352 Tpr-Chr4 3484696 3488190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0352 4 288 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.547 1.42e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0352 - - gmx:100792639 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr4g0352 4 3484696 3488190 Tpr4g0352 4 3484696 3488190 ECH