Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr4g0320 ATGTCTACAAACTTGAAGAATCTTTCACTTTTTCACAAAATCTTTTCCCTCACTTTGCTGCTTTTTTCAATAAACTTTCTGTTCTTTCCATGTTGTAACTCTCTTGATGAACAAGGCCAAACTCTTATGGCATGGAAAGACAGTTTAAACATTACTTCAGATGCTTTAGCATCATGGAATCTTTCAAACCAAACACCATGCAATTGGTTTGGTGTAAAGTGCAATTTACAAGGAGAGGTAGAAGAGATAAATTTGCAGTCATTGAACTTACAAGGTTCATCATTGCCTTCAAATTTTCAACCTCTCAAATCCTTGAAGGTTCTTATCTTCTCATCAACTAACATAACAGGAAGGATTCCAAAACAAATTGGAGATTATCAAGAGCTTGTTTTCATTGATCTCAGTGAAAATTCTCTCTTTGGTGAAATCCCAGAAGAAATTTGCAGGCTAAGCAAACTTCAAAATTTAGCTCTTCATACAAACTCTCTTGAAGGAAACATTCCATTCAACATAGGAAATTTATCAAGTCTTGTGAACTTGACACTCTTTGACAATAAATTCAGTGGCGAAATTCCAAAGAGTATTGGTTCCTTAAGTAAGCTTCAAGTAATCAGAGCAGGAGGGAATTCAAACCTCAAGGGTGAGCTGCCATCAGAGATCGGAAACTGCACCGACTTGGTCATGTTAGGCCTCGCGGAAACCAGCATTTCAGGTAGTATTCCTTCTTCGATAGGGATGCTGAAAAAACTACAGACCATAGCCATTTACACAACTCAGTTGTCAGGCTCTATTCCAGAAGAGATAGGAAATTGCAGTGAGTTGCAGAATCTGTATTTGTATCAGAACTCAATTTCTGGTCCAATTCCACGTCAAATTGGAGAGTTGAACAAACTTCAGAGTCTACTTTTATGGCAAAACAATATGGTAGGGGCAATACCAGAAGAGCTTGGAAACTGCAGAGATCTCAGTGAGATAGATTTGTCAGAAAATCTTCTCACAGGTAGCATACCAGTCAGTTTTGGAAAGCTATCAAATCTGAAAGGACTTCAGCTGAGTGTTAATCAACTGTCAGGTACTATACCACCTGAAATTTCAAACTGCAGTTCTTTGACTCAGCTTGAAGTTGACAACAATGCTATTTCTGGTGAGATTCCTTCTGTTATTGGCAACTTGAGAAGCTTGAAACTCTTCTATGCATGGAAGAACAAGGTAACAGGAAAAATCCCAAATAGTCTTTCAGAGTGCAAAGATCTTCAGTCACTTGATCTTTCATACAATAACTTAACTGGTTCAATACCAAAACAACTATTTGTGTTGAAAAATCTCACTCAACTTATGCTTCTTTCCAATGATTTGGAAGGATTCATACCAACTGATATCGGTAACTGCACAAGTCTCAATAGGTTGAGGTTAAATCAGAATAGACTAGTTGGTAACATTCCATCTGAGATTGCCAACTTGAAAAGTTTGAATTTTTTGGACTTGAACAACAATCATCTTGTAGGGGAGATTCCTCCAACATTATCAAGATGCCAAAATCTTGAGTTTATTGATCTCTCGCATAACAAGCTCTCAGGGAATTTAGATGCTCTTTCTAGCCTTCATAATCTTGTTTCCTTAAATGTTTCCTTCAATGAATTCTCTGGTGAATTGCCTAACACAACATTGTTTAGGAAACTCCCTCTCAGTGATCTCACTGGAAATAAAGGTCTTCATATTTCTGAAGGTGTTGTAACTCCAGCAATCAGAACAAGAGCCAAAAGTCATGTTAGATTCGATATGGAGATTATATTGTTAATTCTCTTGAGCATCATTCTAGTACTAATACTTCTCACATTCTATGTCCTGGTACGTGACCATATTGCTGAGGAAGCATTCTGGAGAAATTTCAAAGCATCCAATATACCTTTGTATCAGGGGATGTTTGGATTCTCTATTGATAAAGTTGTCAAGAATTTCAAAGCATCCAATATCATTGACATTACAAGCTCTGGAATTTTGTACAAGATAACAATTCCAAATGGCAATATACTGGCAGTTAAAAAGATGTGGCCGGATTCTGGAGCCTTAAGTTCAGAAATTCAAATATTAAGTTCAATGAAACATAAGAATATCATCAAGATTCTTGGTTGGCGACCCTATAAGAATAGGATGCTGCAGTTTTATGAATATTTCCCTAGTCTGAGCTCATTGCTTCATGGTTCAGAAAAGGGAAAGTTAGATTGGGATACCAGGTTTGAAGTCATCCTAGGCCTAGCTCAAGCACTTGCATATTTGCATCATGATTGTGTGCCTTCTATATTCCATGGAGATGTCAAAGCAACAAGTCTCTTATTAGGTCCTGGCTATCATCCTTACCTTGCCGACTTTGGCCTGGCAAGAATTGCAAGTGAAAAAGACGATGATGCTAAATCCAATCCAGTTCAAAGACCTCGCTACACTGCGAGTTCACATGGATACACAGATCCTGAGCTTGACTCAATGCAGAAAATCAATGAGAAAACCGACGTGTACAGTTTCGGCGTGATCCTACTTGAGGTGCTGACAGGAAGGCAACCATTAGATCCAACTCTGCCAGGAGGTGTACACTTGGTTCAATGGGTTAAGAATCACTTGTCTAGCAAAGGAAACCCATTAGAAATTCTTGACTCAAAGCTGAGAGAGAAGACTGAACTTACTTCTATGCATGAAATACTACAAACTCTAGCTGTGTCAATTTTATGTGTCGGTGGAAAAGCTTGTGAACGTCCAACAATGAAAGACGCCATTGCAATGCTCAACCAATTTCGATATTTTGTTTAG 2802 0.3812 MSTNLKNLSLFHKIFSLTLLLFSINFLFFPCCNSLDEQGQTLMAWKDSLNITSDALASWNLSNQTPCNWFGVKCNLQGEVEEINLQSLNLQGSSLPSNFQPLKSLKVLIFSSTNITGRIPKQIGDYQELVFIDLSENSLFGEIPEEICRLSKLQNLALHTNSLEGNIPFNIGNLSSLVNLTLFDNKFSGEIPKSIGSLSKLQVIRAGGNSNLKGELPSEIGNCTDLVMLGLAETSISGSIPSSIGMLKKLQTIAIYTTQLSGSIPEEIGNCSELQNLYLYQNSISGPIPRQIGELNKLQSLLLWQNNMVGAIPEELGNCRDLSEIDLSENLLTGSIPVSFGKLSNLKGLQLSVNQLSGTIPPEISNCSSLTQLEVDNNAISGEIPSVIGNLRSLKLFYAWKNKVTGKIPNSLSECKDLQSLDLSYNNLTGSIPKQLFVLKNLTQLMLLSNDLEGFIPTDIGNCTSLNRLRLNQNRLVGNIPSEIANLKSLNFLDLNNNHLVGEIPPTLSRCQNLEFIDLSHNKLSGNLDALSSLHNLVSLNVSFNEFSGELPNTTLFRKLPLSDLTGNKGLHISEGVVTPAIRTRAKSHVRFDMEIILLILLSIILVLILLTFYVLVRDHIAEEAFWRNFKASNIPLYQGMFGFSIDKVVKNFKASNIIDITSSGILYKITIPNGNILAVKKMWPDSGALSSEIQILSSMKHKNIIKILGWRPYKNRMLQFYEYFPSLSSLLHGSEKGKLDWDTRFEVILGLAQALAYLHHDCVPSIFHGDVKATSLLLGPGYHPYLADFGLARIASEKDDDAKSNPVQRPRYTASSHGYTDPELDSMQKINEKTDVYSFGVILLEVLTGRQPLDPTLPGGVHLVQWVKNHLSSKGNPLEILDSKLREKTELTSMHEILQTLAVSILCVGGKACERPTMKDAIAMLNQFRYFV* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr4g0320 933 SUPERFAMILY Protein kinase-like (PK-like) 645 928 IPR011009 -
Tpr4g0320 933 Gene3D Phosphorylase Kinase; domain 1 639 724 - -
Tpr4g0320 933 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Tpr4g0320 933 Gene3D Ribonuclease Inhibitor 391 579 IPR032675 -
Tpr4g0320 933 ProSiteProfiles Protein kinase domain profile. 653 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0320 933 PRINTS Leucine-rich repeat signature 418 431 - -
Tpr4g0320 933 PRINTS Leucine-rich repeat signature 487 500 - -
Tpr4g0320 933 SMART LRR_typ_2 534 559 IPR003591 -
Tpr4g0320 933 SMART LRR_typ_2 343 367 IPR003591 -
Tpr4g0320 933 SMART LRR_typ_2 415 439 IPR003591 -
Tpr4g0320 933 SMART LRR_typ_2 295 319 IPR003591 -
Tpr4g0320 933 SMART LRR_typ_2 487 511 IPR003591 -
Tpr4g0320 933 SUPERFAMILY L domain-like 264 576 - -
Tpr4g0320 933 ProSiteProfiles Leucine-rich repeat profile. 513 535 IPR001611 GO:0005515
Tpr4g0320 933 SUPERFAMILY RNI-like 82 337 - -
Tpr4g0320 933 Gene3D Ribonuclease Inhibitor 193 289 IPR032675 -
Tpr4g0320 933 Gene3D Ribonuclease Inhibitor 290 388 IPR032675 -
Tpr4g0320 933 Gene3D Ribonuclease Inhibitor 35 192 IPR032675 -
Tpr4g0320 933 Pfam Protein kinase domain 672 855 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr4g0320 933 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 519 - -
Tpr4g0320 933 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 517 932 - -
Tpr4g0320 933 Pfam Leucine rich repeat 322 380 IPR001611 GO:0005515
Tpr4g0320 933 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 519 - -
Tpr4g0320 933 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 517 932 - -
Tpr4g0320 933 Gene3D Transferase(Phosphotransferase) domain 1 726 931 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr4g0320 Tpr-Chr4 3171270 3174861 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr4g0320 95 932 Receptor kinase-like Gene Family AT5G56040 47.181 0.0 728
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tpr4g0320 Pkinase 5.1e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr4g0320 - - cam:101492613 1372.84